| Definition | Sulfolobus islandicus M.14.25 chromosome, complete genome. |
|---|---|
| Accession | NC_012588 |
| Length | 2,608,832 |
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The map label for this gene is 227826435
Identifier: 227826435
GI number: 227826435
Start: 22069
End: 22731
Strand: Direct
Name: 227826435
Synonym: M1425_0024
Alternate gene names: NA
Gene position: 22069-22731 (Clockwise)
Preceding gene: 227826434
Following gene: 227826437
Centisome position: 0.85
GC content: 29.11
Gene sequence:
>663_bases ATGAGCTGGATAAGAGATACCAGTTTTCTTATGGAGTGTGTCAAGAATGGGAGCATAAAGATTGAAATTAATGTTTCTAA TTATTCCATGTCCTTTAATCTCCTTAACGGAAAATATAATTTATCGTTATTTTCATCAGATAATATTAGAATATCATATG ATGGGAATAGGCTAATTGATATGCATAACTTAAGAGTTTTGAAGGATCATGATGCCAGAGTACACATTTCTAATATGATT AGTAATATCAAGGGAAATATGTCAAATGAGATAAACAACTTGGCTATAATGTATAATATTCCAGTGAAAATTCTAAATGA TAACCTAGAAGCAATATTTAATCTTAATTTCTCATTGTTAAGCTGTTTAGATTACGGTTTAGATTATTTTCTAATTCATT TAACTAATGACTTTGCAAAGCAGTCTTCTCAATTTGATGTAATAAAGAAGTTGAAATTGATACTAGCCAATGAAAAGGGA TGTATTAAGGCTATTTTAGCCTTATCTAACACCTACGAATCGGATTCTTTTTTGTTTTCTAATGATTGTATAAGTTTTCA GGTTAACGTGAATGGATTCTCTAAATTCTTGATGGATTATAGGACGCTCAATGCAAAATATACGGAAGTTATAGATTATC TTAAACAACGATTATCTCAGTAA
Upstream 100 bases:
>100_bases ATATTACTGAAGGTCTTCTAAGTATATTTGTAGATTCTGTAAGGTTCGAGATAGGCTTCTGGGAGGCCTCTTTAAGGAAA GACCCTATGGTGTACTAAAA
Downstream 100 bases:
>100_bases CTAGAATACTTCTGTATGTCGTATCTGATAAACTCAAGCCCTAATTTTTGTAATAGTTCTCTTGCATGAGTAGTTAAATC CGGAGCTACGAGTATCCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSWIRDTSFLMECVKNGSIKIEINVSNYSMSFNLLNGKYNLSLFSSDNIRISYDGNRLIDMHNLRVLKDHDARVHISNMI SNIKGNMSNEINNLAIMYNIPVKILNDNLEAIFNLNFSLLSCLDYGLDYFLIHLTNDFAKQSSQFDVIKKLKLILANEKG CIKAILALSNTYESDSFLFSNDCISFQVNVNGFSKFLMDYRTLNAKYTEVIDYLKQRLSQ
Sequences:
>Translated_220_residues MSWIRDTSFLMECVKNGSIKIEINVSNYSMSFNLLNGKYNLSLFSSDNIRISYDGNRLIDMHNLRVLKDHDARVHISNMI SNIKGNMSNEINNLAIMYNIPVKILNDNLEAIFNLNFSLLSCLDYGLDYFLIHLTNDFAKQSSQFDVIKKLKLILANEKG CIKAILALSNTYESDSFLFSNDCISFQVNVNGFSKFLMDYRTLNAKYTEVIDYLKQRLSQ >Mature_219_residues SWIRDTSFLMECVKNGSIKIEINVSNYSMSFNLLNGKYNLSLFSSDNIRISYDGNRLIDMHNLRVLKDHDARVHISNMIS NIKGNMSNEINNLAIMYNIPVKILNDNLEAIFNLNFSLLSCLDYGLDYFLIHLTNDFAKQSSQFDVIKKLKLILANEKGC IKAILALSNTYESDSFLFSNDCISFQVNVNGFSKFLMDYRTLNAKYTEVIDYLKQRLSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25338; Mature: 25207
Theoretical pI: Translated: 7.44; Mature: 7.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWIRDTSFLMECVKNGSIKIEINVSNYSMSFNLLNGKYNLSLFSSDNIRISYDGNRLID CCCCHHHHHHHHHHHCCCEEEEEEEECEEEEEEEECCEEEEEEEECCCEEEEECCCEEEE MHNLRVLKDHDARVHISNMISNIKGNMSNEINNLAIMYNIPVKILNDNLEAIFNLNFSLL ECCEEEEECCCCEEEHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCEEEEEECCHHHH SCLDYGLDYFLIHLTNDFAKQSSQFDVIKKLKLILANEKGCIKAILALSNTYESDSFLFS HHHHHCHHEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEE NDCISFQVNVNGFSKFLMDYRTLNAKYTEVIDYLKQRLSQ CCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure SWIRDTSFLMECVKNGSIKIEINVSNYSMSFNLLNGKYNLSLFSSDNIRISYDGNRLID CCCHHHHHHHHHHHCCCEEEEEEEECEEEEEEEECCEEEEEEEECCCEEEEECCCEEEE MHNLRVLKDHDARVHISNMISNIKGNMSNEINNLAIMYNIPVKILNDNLEAIFNLNFSLL ECCEEEEECCCCEEEHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCEEEEEECCHHHH SCLDYGLDYFLIHLTNDFAKQSSQFDVIKKLKLILANEKGCIKAILALSNTYESDSFLFS HHHHHCHHEEEEEEECHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEE NDCISFQVNVNGFSKFLMDYRTLNAKYTEVIDYLKQRLSQ CCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA