Click here to switch to the map view.

The map label for this gene is 227826434

Identifier: 227826434

GI number: 227826434

Start: 21425

End: 22066

Strand: Direct

Name: 227826434

Synonym: M1425_0023

Alternate gene names: NA

Gene position: 21425-22066 (Clockwise)

Preceding gene: 227826433

Following gene: 227826435

Centisome position: 0.82

GC content: 33.8

Gene sequence:

>642_bases
GTGTCTATAGTGAGTAATGTTGAAAATTTGATTGAAAGCGTAGGAGAATTATGGAATAGGTATGTTAAACACGAATTCGT
ACTTAAGATGAGAGATGGATCTCTTCCATTAGATATCTTTAGATATTACCTAATACAGGATGGAAAATACGTAGAGGACA
TGCTAAGGGCATTGCTTATTGCCTCAAGTAAAGGTCCTATTGATAAAGTTACTAAGATACTTAATTTAGTTTTTTCCACT
CGGAATAAGGGGTTAGAAATTCATAGTAAACTTTATTCTGAGTTGAGTATTTCTAGAGATGAGATAGTTAAAACTAGATA
CAATCTAATAAATTACGCTTATACGAGACATTTACACTTCTATGCTAATCTAGATTGGAATAAATTTTTGGTTGCATGGA
CTCCATGTATGTTTGGATACAGTATAATTGGTGATTATGTAGTTGAGTCCCCTCACCAACTCTATAAAACGTGGGCCTCA
TTTTATGCTTCAAATGAATATAAAAAGAGAGTTGAAGCTATTCTTCATGCCTTAAACGAGGTAAATATTACTGAAGGTCT
TCTAAGTATATTTGTAGATTCTGTAAGGTTCGAGATAGGCTTCTGGGAGGCCTCTTTAAGGAAAGACCCTATGGTGTACT
AA

Upstream 100 bases:

>100_bases
AGAGGATTTCGCTAGGATCATTATTTGGCTTTTAACTGACGAATCAGATTGGGTAGATGGTGTGGTAATACCAGCTCACG
GTGGTGCAAGGCTAAAATAG

Downstream 100 bases:

>100_bases
AAATGAGCTGGATAAGAGATACCAGTTTTCTTATGGAGTGTGTCAAGAATGGGAGCATAAAGATTGAAATTAATGTTTCT
AATTATTCCATGTCCTTTAA

Product: TenA family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MSIVSNVENLIESVGELWNRYVKHEFVLKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNLVFST
RNKGLEIHSKLYSELSISRDEIVKTRYNLINYAYTRHLHFYANLDWNKFLVAWTPCMFGYSIIGDYVVESPHQLYKTWAS
FYASNEYKKRVEAILHALNEVNITEGLLSIFVDSVRFEIGFWEASLRKDPMVY

Sequences:

>Translated_213_residues
MSIVSNVENLIESVGELWNRYVKHEFVLKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNLVFST
RNKGLEIHSKLYSELSISRDEIVKTRYNLINYAYTRHLHFYANLDWNKFLVAWTPCMFGYSIIGDYVVESPHQLYKTWAS
FYASNEYKKRVEAILHALNEVNITEGLLSIFVDSVRFEIGFWEASLRKDPMVY
>Mature_212_residues
SIVSNVENLIESVGELWNRYVKHEFVLKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLIASSKGPIDKVTKILNLVFSTR
NKGLEIHSKLYSELSISRDEIVKTRYNLINYAYTRHLHFYANLDWNKFLVAWTPCMFGYSIIGDYVVESPHQLYKTWASF
YASNEYKKRVEAILHALNEVNITEGLLSIFVDSVRFEIGFWEASLRKDPMVY

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324997, Length=203, Percent_Identity=29.064039408867, Blast_Score=80, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6324517, Length=204, Percent_Identity=27.4509803921569, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6325378, Length=204, Percent_Identity=26.4705882352941, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 24986; Mature: 24855

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVSNVENLIESVGELWNRYVKHEFVLKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLI
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
ASSKGPIDKVTKILNLVFSTRNKGLEIHSKLYSELSISRDEIVKTRYNLINYAYTRHLHF
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEE
YANLDWNKFLVAWTPCMFGYSIIGDYVVESPHQLYKTWASFYASNEYKKRVEAILHALNE
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VNITEGLLSIFVDSVRFEIGFWEASLRKDPMVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SIVSNVENLIESVGELWNRYVKHEFVLKMRDGSLPLDIFRYYLIQDGKYVEDMLRALLI
CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
ASSKGPIDKVTKILNLVFSTRNKGLEIHSKLYSELSISRDEIVKTRYNLINYAYTRHLHF
HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEE
YANLDWNKFLVAWTPCMFGYSIIGDYVVESPHQLYKTWASFYASNEYKKRVEAILHALNE
EEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
VNITEGLLSIFVDSVRFEIGFWEASLRKDPMVY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]