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The map label for this gene is comFC [H]

Identifier: 227817951

GI number: 227817951

Start: 4914777

End: 4915349

Strand: Reverse

Name: comFC [H]

Synonym: BAMEG_5476

Alternate gene names: 227817951

Gene position: 4915349-4914777 (Counterclockwise)

Preceding gene: 227817952

Following gene: 227817950

Centisome position: 93.98

GC content: 36.3

Gene sequence:

>573_bases
ATGGAGTGCGGGCGACCTTTAGAACTTCTCTCTACTGTATTTAAAAAGGATGATATTTGTATGGATTGTATACGGTGGAT
GAAGGAAGAGAAGTATCGACCTTTAAAAAATCGTTCTTTATATGTATACGATGATGAGATGAAAGCAGTATTAGCACAGT
TTAAGTTTCGAGGTGATGCGGAATTAGTTCGTATTTTTTATCGATCTTTTCGGGAGCTATTTCAAAAGTATTTTACGAAC
GTTTCAACTGTTATTCCTGTTCCGCTTAGTAGGGAACGGGAATATGAACGTGGTTTTAATCAAGCAGAGTTATTAGCAGC
TTGTTTGCCTGTCGAAATTTCTTATCTATCATTAAGAAGAAGGGAAACAGAAAAGCAAAGTAAGAAGTCACGTAAAGAAA
GACTTTCGGGAAGTAATCCTTTTTATTTTCAAAGAGAAGAGATGTTTCATGGTCAACGCATTTTACTTGTTGACGATGTA
TATACGACAGGAATTACAGTGAGACAAATTGGAAGTCTTTTGTATGATAGAGGAGCAAGGGAAGTTTCTAGTTTGACGCT
CTGTAGAAGTTGA

Upstream 100 bases:

>100_bases
GGAAACAGTTAGTTGGTACACTTTCTTTGTAAAGTCTCATAAAAAATATGTATGTGATAGATGTGAGCGGAAACTTTCCT
ATATTATAGGAGAGATTTGC

Downstream 100 bases:

>100_bases
TCTGTAACTGTCGAAAGTGATAATAAAAAGGCGATAAGTCTTCTTTGACTTCGTATGTTGTCATTCGTTATAGTCAAATT
ATGGGGCGAATGCCATGATT

Product: comF operon protein 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MECGRPLELLSTVFKKDDICMDCIRWMKEEKYRPLKNRSLYVYDDEMKAVLAQFKFRGDAELVRIFYRSFRELFQKYFTN
VSTVIPVPLSREREYERGFNQAELLAACLPVEISYLSLRRRETEKQSKKSRKERLSGSNPFYFQREEMFHGQRILLVDDV
YTTGITVRQIGSLLYDRGAREVSSLTLCRS

Sequences:

>Translated_190_residues
MECGRPLELLSTVFKKDDICMDCIRWMKEEKYRPLKNRSLYVYDDEMKAVLAQFKFRGDAELVRIFYRSFRELFQKYFTN
VSTVIPVPLSREREYERGFNQAELLAACLPVEISYLSLRRRETEKQSKKSRKERLSGSNPFYFQREEMFHGQRILLVDDV
YTTGITVRQIGSLLYDRGAREVSSLTLCRS
>Mature_190_residues
MECGRPLELLSTVFKKDDICMDCIRWMKEEKYRPLKNRSLYVYDDEMKAVLAQFKFRGDAELVRIFYRSFRELFQKYFTN
VSTVIPVPLSREREYERGFNQAELLAACLPVEISYLSLRRRETEKQSKKSRKERLSGSNPFYFQREEMFHGQRILLVDDV
YTTGITVRQIGSLLYDRGAREVSSLTLCRS

Specific function: Involved in transformation (competence for DNA uptake) [H]

COG id: COG1040

COG function: function code R; Predicted amidophosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ComF/GntX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005222
- InterPro:   IPR000836 [H]

Pfam domain/function: PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 22574; Mature: 22574

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECGRPLELLSTVFKKDDICMDCIRWMKEEKYRPLKNRSLYVYDDEMKAVLAQFKFRGDA
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCH
ELVRIFYRSFRELFQKYFTNVSTVIPVPLSREREYERGFNQAELLAACLPVEISYLSLRR
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RETEKQSKKSRKERLSGSNPFYFQREEMFHGQRILLVDDVYTTGITVRQIGSLLYDRGAR
HHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCEEEEEECHHHCCHHHHHHHHHHHHCCHH
EVSSLTLCRS
HHHHHHHCCC
>Mature Secondary Structure
MECGRPLELLSTVFKKDDICMDCIRWMKEEKYRPLKNRSLYVYDDEMKAVLAQFKFRGDA
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHCCCCH
ELVRIFYRSFRELFQKYFTNVSTVIPVPLSREREYERGFNQAELLAACLPVEISYLSLRR
HHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RETEKQSKKSRKERLSGSNPFYFQREEMFHGQRILLVDDVYTTGITVRQIGSLLYDRGAR
HHHHHHHHHHHHHHCCCCCCCEEEHHHHHCCCEEEEEECHHHCCHHHHHHHHHHHHCCHH
EVSSLTLCRS
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8412657; 8045879; 9384377 [H]