Click here to switch to the map view.

The map label for this gene is yxdM [H]

Identifier: 227817633

GI number: 227817633

Start: 4616342

End: 4616962

Strand: Direct

Name: yxdM [H]

Synonym: BAMEG_5127

Alternate gene names: 227817633

Gene position: 4616342-4616962 (Clockwise)

Preceding gene: 227817632

Following gene: 227817634

Centisome position: 88.26

GC content: 31.88

Gene sequence:

>621_bases
ATGGTTTTCTTTTCATTTACTGTATACGCGTATCATCCACGCTTACAAATTATGAATAAATTACAGGAACAAGATCCATT
GATGAACTTAGCCGGCATGGCACAGTTTGTTATCGTTTTGTTCTCGTTCTTCTTTCTCTTATATTCTATTGGGACGTTTT
TAAATGTACGGAAGCAACAATTTGGCGTTTTAACTGTTCTCGGTATATCTCAAAAACAATTAAAACGTCTTTTGTTTACT
GAAAATATGATTATTGGAATGCTTGCTATCTTTGCAGGTATTCAAGGCGGTCTCGTGTTCTCTAACTTTTTCTTACTCGT
TACTTCTAAATTAACAAATGCAAAAGGCCTCTATTTATATTGGCCAACAGAAGCTATTATCGTTACAACAATAACTTTTA
TTATTTTATTTTTCATCGTCTCTACATTTACACCAATGTTCATTCGTACTCGGAAAACAACTCGATTACTTAAAAATAAT
AAAAAAGAAAAAAGCGAAAAAAGACCGTCTATACTCATTTCATTATTTGCTTTAATTTGTTTAGGGCTATGCTATTATAT
CGCTGGTTATCCGCAAGGCTATATAACAGAAAAAATGTACAAAATGGATCTGTATTCTTAA

Upstream 100 bases:

>100_bases
GAGGAAGACGTGGATGACATTTTGGCAATTTGCATTTAAAAATGTCTCGCGTAATTCCAAAGCATATTTCGCTTATTTTG
TGAGTAGCGCGTTTTCGATC

Downstream 100 bases:

>100_bases
TTATGCTATCTATTTTACCGCTCGTAGTGGTGGGAACATATTTATTCTTTTCACAAACGTTTCTTCTCTTTATCTTTATT
TTGAAAAAGCGGAGAAAGTT

Product: putative ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIGTFLNVRKQQFGVLTVLGISQKQLKRLLFT
ENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTITFIILFFIVSTFTPMFIRTRKTTRLLKNN
KKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS

Sequences:

>Translated_206_residues
MVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIGTFLNVRKQQFGVLTVLGISQKQLKRLLFT
ENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTITFIILFFIVSTFTPMFIRTRKTTRLLKNN
KKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS
>Mature_206_residues
MVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIGTFLNVRKQQFGVLTVLGISQKQLKRLLFT
ENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLYWPTEAIIVTTITFIILFFIVSTFTPMFIRTRKTTRLLKNN
KKEKSEKRPSILISLFALICLGLCYYIAGYPQGYITEKMYKMDLYS

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 23819; Mature: 23819

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIGTFLNVRKQQ
CEEEEEEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVLTVLGISQKQLKRLLFTENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLY
HCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
WPTEAIIVTTITFIILFFIVSTFTPMFIRTRKTTRLLKNNKKEKSEKRPSILISLFALIC
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LGLCYYIAGYPQGYITEKMYKMDLYS
HHHHHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MVFFSFTVYAYHPRLQIMNKLQEQDPLMNLAGMAQFVIVLFSFFFLLYSIGTFLNVRKQQ
CEEEEEEEEEECHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGVLTVLGISQKQLKRLLFTENMIIGMLAIFAGIQGGLVFSNFFLLVTSKLTNAKGLYLY
HCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEE
WPTEAIIVTTITFIILFFIVSTFTPMFIRTRKTTRLLKNNKKEKSEKRPSILISLFALIC
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LGLCYYIAGYPQGYITEKMYKMDLYS
HHHHHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]