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The map label for this gene is yxdM [H]

Identifier: 227817634

GI number: 227817634

Start: 4617067

End: 4618233

Strand: Direct

Name: yxdM [H]

Synonym: BAMEG_5128

Alternate gene names: 227817634

Gene position: 4617067-4618233 (Clockwise)

Preceding gene: 227817633

Following gene: 227817653

Centisome position: 88.28

GC content: 31.02

Gene sequence:

>1167_bases
ATGAAGCAAATAAATATGTTATGGATTTCAGATTTAGCTAACCGCACTCGTAGTAATATTAATGTACTCTTTATCGTTTC
TATGCTATCTGCACTTGCATTTACAATTATTATCGCGCTATTTGCTATCAATAATAATACGAAAGCAATGATATTAGAAC
GTTTTCCTATCCCCTTCACATATACATCTAAAGGGGAAAATTCACTTGAACAAAAACATATTGCTACAATTGAAATGGAG
CTTACAAATGCTAATTTTCAATACAGCAAGCATCAGTCTACATTGTTAAAAGATACCGCTTTAAAAGAAGACATTACTCT
TATGAAAATGAGTGATTATAACACGCTTGCAAAACAATTAAGGAGACCAGAAATAAATCTTGATTCTACACAAGTTTATA
TTATTTCTCGTTACTCACCAGAGCTCTTAAATCTTGTATCAAATCCATTCGCAAAACAAAATACAATTACAATCGGATCT
AATAAAAAAGAATTTCACATTAAAGGATTTATTAATAAATCCATTGAACCCGCCTTCGCATTCCCTTATTTAATGGTTGT
ACAAGATGATGTATTCAATAATATGATTCCTCATATTGAAACAACCATAGTGTATAATTACTTCGTTGAAAACTGGGAAA
ATGCGATTGCTCCTACGAAAAATATATTAAAGCATATTAGAAATGATACAGATAACTTCTATGAGGCACACAAAGATGCG
GAAGGTAATTTTCAACCCCCATTTAATATTTATACAGCTGCCGATGACCTGAAATACAGCAAAGGAAATTCAATTGCTAC
GTTCTTTATTTGGGCATTTCTCGGTTTTATTTTCTTTATCGGTGCGGCTAGTGTTTTATACTTCCGTATGTATAACGACT
TAACAAATGAAAAGCAAAAATATATTACGATTACAAAACTTGGTTTAACAGAATCAGAAATGTTTCGCTCTGCAACGATT
CAATTAGGAATTTTATTTTTCGTTCCTTATATCGTTGCTGGTATTCACACATTATTTGCGGTTAAGTTTTTACAAAGCAT
ACTCGCTTTTTCTTTACTAAAAGAGTTATTAATTGTACTCACTTTCTTTGGGATTATCGAGATTATTTTCTTCTTCTTAA
TCCGATCTCTGTACATTAATAAATTATCACAGCACATAAAAATATGA

Upstream 100 bases:

>100_bases
GCTATCTATTTTACCGCTCGTAGTGGTGGGAACATATTTATTCTTTTCACAAACGTTTCTTCTCTTTATCTTTATTTTGA
AAAAGCGGAGAAAGTTTTAT

Downstream 100 bases:

>100_bases
ATAAAATGGCCTTGTGCAATACGCACAAGGCCATTTTCAATAGTTTTTAATTAGCAGCAATATCCACCGTAGCCGCCAGC
ATAACCGCCGTAACCACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKQINMLWISDLANRTRSNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFTYTSKGENSLEQKHIATIEME
LTNANFQYSKHQSTLLKDTALKEDITLMKMSDYNTLAKQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGS
NKKEFHIKGFINKSIEPAFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDA
EGNFQPPFNIYTAADDLKYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQKYITITKLGLTESEMFRSATI
QLGILFFVPYIVAGIHTLFAVKFLQSILAFSLLKELLIVLTFFGIIEIIFFFLIRSLYINKLSQHIKI

Sequences:

>Translated_388_residues
MKQINMLWISDLANRTRSNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFTYTSKGENSLEQKHIATIEME
LTNANFQYSKHQSTLLKDTALKEDITLMKMSDYNTLAKQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGS
NKKEFHIKGFINKSIEPAFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDA
EGNFQPPFNIYTAADDLKYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQKYITITKLGLTESEMFRSATI
QLGILFFVPYIVAGIHTLFAVKFLQSILAFSLLKELLIVLTFFGIIEIIFFFLIRSLYINKLSQHIKI
>Mature_388_residues
MKQINMLWISDLANRTRSNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFTYTSKGENSLEQKHIATIEME
LTNANFQYSKHQSTLLKDTALKEDITLMKMSDYNTLAKQLRRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGS
NKKEFHIKGFINKSIEPAFAFPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDA
EGNFQPPFNIYTAADDLKYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQKYITITKLGLTESEMFRSATI
QLGILFFVPYIVAGIHTLFAVKFLQSILAFSLLKELLIVLTFFGIIEIIFFFLIRSLYINKLSQHIKI

Specific function: Part of the ABC transporter complex yxdLM which could be involved in peptide resistance [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 44786; Mature: 44786

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQINMLWISDLANRTRSNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFT
CCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE
YTSKGENSLEQKHIATIEMELTNANFQYSKHQSTLLKDTALKEDITLMKMSDYNTLAKQL
ECCCCCCHHHHHHEEEEEEEEECCCCEECHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
RRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGSNKKEFHIKGFINKSIEPAFA
CCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHH
FPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDA
CCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCC
EGNFQPPFNIYTAADDLKYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQK
CCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YITITKLGLTESEMFRSATIQLGILFFVPYIVAGIHTLFAVKFLQSILAFSLLKELLIVL
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFGIIEIIFFFLIRSLYINKLSQHIKI
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQINMLWISDLANRTRSNINVLFIVSMLSALAFTIIIALFAINNNTKAMILERFPIPFT
CCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEE
YTSKGENSLEQKHIATIEMELTNANFQYSKHQSTLLKDTALKEDITLMKMSDYNTLAKQL
ECCCCCCHHHHHHEEEEEEEEECCCCEECHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
RRPEINLDSTQVYIISRYSPELLNLVSNPFAKQNTITIGSNKKEFHIKGFINKSIEPAFA
CCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHH
FPYLMVVQDDVFNNMIPHIETTIVYNYFVENWENAIAPTKNILKHIRNDTDNFYEAHKDA
CCCCEEEEHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCC
EGNFQPPFNIYTAADDLKYSKGNSIATFFIWAFLGFIFFIGAASVLYFRMYNDLTNEKQK
CCCCCCCCEEEECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YITITKLGLTESEMFRSATIQLGILFFVPYIVAGIHTLFAVKFLQSILAFSLLKELLIVL
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFFGIIEIIFFFLIRSLYINKLSQHIKI
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377; 7952181 [H]