Click here to switch to the map view.

The map label for this gene is tsr [C]

Identifier: 227816571

GI number: 227816571

Start: 3673326

End: 3675302

Strand: Reverse

Name: tsr [C]

Synonym: BAMEG_4028

Alternate gene names: 227816571

Gene position: 3675302-3673326 (Counterclockwise)

Preceding gene: 227816572

Following gene: 227816570

Centisome position: 70.27

GC content: 34.55

Gene sequence:

>1977_bases
ATGCTTCAAGGAAAATTAAGAAGAAGTAGCTTAAAAGCAAAGTTACTTGTATCATTTGTTATTGTTTTAATTCTTCCAAG
TATTGTAATTGGTTGGACGTCTTATCAACAAGCGAAGACAAATTTTAATGAAACAATTTTACAATCAGCGGAAGATAACG
TAAAGATTTTAAATAATGTTATTAACAAAGAGATAGACAGTAAAAAGGTAGACGCAGTATATTTTACAAAGTTATTTAAT
GGAGTAAGTTACGGAACTGATCAGCTCCAAAATGTGCAAAATAAATTAGAAGAATATAATAAATTACATCCAGAAATAGA
AGCAATTTATACGGGATCTAGTACGGGGCAATTTATTCAATCACCGTCTATTCAAATGCCAGATGGATATAATCCTACCG
AAAGAGATTGGTATAAAGAAGCAGCGAAAAAAAGCGGGGAAGTGGTTATAACAGCCCCATATAAGTCAAGTACAACAGGG
AATATTGTTATTACAATAGCAAAACAAAATGAGGATAAAAGTGGTGTTCTCGGTATTGATTTAATTATTAATGATATTGT
AAATACTTCAAAAATGGTCAATATCGGCAAAACAGGATTTGTAGCAATCTTCGACCAATCTAAACATGTAATAGCGCATC
CGACGATAAAACCAGGTGACAAGATAGAAGAAAAAGTGGAGAAAGAATTGTACAAACAGGAAACAGGTGACTTTAAATTC
AAACTCGATGGTGATGATCGCAATATTACCTTTATAACAAATAAGCAGACTGGATGGAAAATAGCAGGAATTATGCCTTC
AAAAGAAATTATTGAAGCAGCTAATCCTATTTTCTATAAAACGCTAACTGTTATTGGTATTTCATTAATAATTGGCGGGG
TTTTAATTTACTTCATAATTGCTTCTATTATTAGTCCGTTAAAACAACTTGTTATATCATCAAAAAAGATTAGTGAAGGT
GATTTAACAGAAACAATTACAGTTCATTCTAAAGATGAGATTGGACAGCTAGGAGAAAGTTTTAACGAGATGGCGGCATC
ATTACATCATGTCATTTCCAATATAAATACTTCAGCAAGTCATGTAGCGGCATCTTCAGAAGAATTAACAGCTAGTATGA
AGCAGACAAGTGAAGCGACGGAACAAATTACACAAGCAATAGAGCAAGTGTCGAGTGGGGCTGAAATACAAACGAAAGAA
GTTGAAGAAGGCGCAACATTATTAGAAGAAGTTACAGAAGGAATTCAGCGTGTTGCAGACAGTTCTTCATTAGTATCCAC
AGCATCTATGTATACGAAGAAAAAGGCTGAAGATGGTGGGAAGTTAGTTGAACAAACTGTAAATCAAATGCAATTAATCC
ATGAGTCTGTTTCACAATCAGATAAGGTTATTGTTTTGTTAGATGATAAATCAAAACAAATTGGGGCAATCCTTGAGGTG
ATTCAACATATTGCAGAGCAGACAAATTTATTAGCGCTAAATGCGGCAATTGAGGCTGCAAGAGCCGGAGAACAAGGAAG
AGGATTTGCAATTGTAGCAGATGAAGTACGAAAATTAGCTGAGCAATCAGGACAGTCTTCTACGGAAATTGGAAAACTAG
TGAAAGAAATCCAATTTGATATAAAAGAAACGGTAAGTTCTATGAAGCTAGTTGGGACAGAAGTACAATCAGGGCTTGTA
GTTGCAAATGAAACGAAGCAAAGCTTTGCTGAAATATTGAAATCTACGGATGATACAGTTGTACAAATTGATAATATGGT
AGATGTAGCGAAGCAAATGACGGTAGATGCAAGACAAGTAAGTGCATCCATTAATGAAATTGCAGCTACGATTGAAGAAA
ATGCAGCAAGCGTTCAAAATATTGCTGGTTCCTCTGAAGAACAATTAGCTTCAGTAGACGAAATAAATGCAGCAGCAGTT
CACTTATCACAAATGGCAGAGGAATTACAAGAGATGATTGGTAAGTTTAAAGTGTAA

Upstream 100 bases:

>100_bases
GAAAAAGAGATAAAGAGTTGATACATCTTAATCGTATAATTTATATAAAGAAATTAAATGTAAGTTAATTACATTTAAAA
CGGTATGGAGGGGTAGAAAT

Downstream 100 bases:

>100_bases
TAATAAATGTTAAGAAACGAGGTAATAATTTTACTTCGTTTCTTTTTTTATGAAGAGAAAAAGACAGAAATATAGAGTAA
CCGTGTTATGATTAAGTATA

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MLQGKLRRSSLKAKLLVSFVIVLILPSIVIGWTSYQQAKTNFNETILQSAEDNVKILNNVINKEIDSKKVDAVYFTKLFN
GVSYGTDQLQNVQNKLEEYNKLHPEIEAIYTGSSTGQFIQSPSIQMPDGYNPTERDWYKEAAKKSGEVVITAPYKSSTTG
NIVITIAKQNEDKSGVLGIDLIINDIVNTSKMVNIGKTGFVAIFDQSKHVIAHPTIKPGDKIEEKVEKELYKQETGDFKF
KLDGDDRNITFITNKQTGWKIAGIMPSKEIIEAANPIFYKTLTVIGISLIIGGVLIYFIIASIISPLKQLVISSKKISEG
DLTETITVHSKDEIGQLGESFNEMAASLHHVISNINTSASHVAASSEELTASMKQTSEATEQITQAIEQVSSGAEIQTKE
VEEGATLLEEVTEGIQRVADSSSLVSTASMYTKKKAEDGGKLVEQTVNQMQLIHESVSQSDKVIVLLDDKSKQIGAILEV
IQHIAEQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGQSSTEIGKLVKEIQFDIKETVSSMKLVGTEVQSGLV
VANETKQSFAEILKSTDDTVVQIDNMVDVAKQMTVDARQVSASINEIAATIEENAASVQNIAGSSEEQLASVDEINAAAV
HLSQMAEELQEMIGKFKV

Sequences:

>Translated_658_residues
MLQGKLRRSSLKAKLLVSFVIVLILPSIVIGWTSYQQAKTNFNETILQSAEDNVKILNNVINKEIDSKKVDAVYFTKLFN
GVSYGTDQLQNVQNKLEEYNKLHPEIEAIYTGSSTGQFIQSPSIQMPDGYNPTERDWYKEAAKKSGEVVITAPYKSSTTG
NIVITIAKQNEDKSGVLGIDLIINDIVNTSKMVNIGKTGFVAIFDQSKHVIAHPTIKPGDKIEEKVEKELYKQETGDFKF
KLDGDDRNITFITNKQTGWKIAGIMPSKEIIEAANPIFYKTLTVIGISLIIGGVLIYFIIASIISPLKQLVISSKKISEG
DLTETITVHSKDEIGQLGESFNEMAASLHHVISNINTSASHVAASSEELTASMKQTSEATEQITQAIEQVSSGAEIQTKE
VEEGATLLEEVTEGIQRVADSSSLVSTASMYTKKKAEDGGKLVEQTVNQMQLIHESVSQSDKVIVLLDDKSKQIGAILEV
IQHIAEQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGQSSTEIGKLVKEIQFDIKETVSSMKLVGTEVQSGLV
VANETKQSFAEILKSTDDTVVQIDNMVDVAKQMTVDARQVSASINEIAATIEENAASVQNIAGSSEEQLASVDEINAAAV
HLSQMAEELQEMIGKFKV
>Mature_658_residues
MLQGKLRRSSLKAKLLVSFVIVLILPSIVIGWTSYQQAKTNFNETILQSAEDNVKILNNVINKEIDSKKVDAVYFTKLFN
GVSYGTDQLQNVQNKLEEYNKLHPEIEAIYTGSSTGQFIQSPSIQMPDGYNPTERDWYKEAAKKSGEVVITAPYKSSTTG
NIVITIAKQNEDKSGVLGIDLIINDIVNTSKMVNIGKTGFVAIFDQSKHVIAHPTIKPGDKIEEKVEKELYKQETGDFKF
KLDGDDRNITFITNKQTGWKIAGIMPSKEIIEAANPIFYKTLTVIGISLIIGGVLIYFIIASIISPLKQLVISSKKISEG
DLTETITVHSKDEIGQLGESFNEMAASLHHVISNINTSASHVAASSEELTASMKQTSEATEQITQAIEQVSSGAEIQTKE
VEEGATLLEEVTEGIQRVADSSSLVSTASMYTKKKAEDGGKLVEQTVNQMQLIHESVSQSDKVIVLLDDKSKQIGAILEV
IQHIAEQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGQSSTEIGKLVKEIQFDIKETVSSMKLVGTEVQSGLV
VANETKQSFAEILKSTDDTVVQIDNMVDVAKQMTVDARQVSASINEIAATIEENAASVQNIAGSSEEQLASVDEINAAAV
HLSQMAEELQEMIGKFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=256, Percent_Identity=33.984375, Blast_Score=140, Evalue=3e-34,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=35, Blast_Score=134, Evalue=2e-32,
Organism=Escherichia coli, GI1787690, Length=385, Percent_Identity=30.9090909090909, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1788194, Length=263, Percent_Identity=31.5589353612167, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1789453, Length=280, Percent_Identity=26.7857142857143, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 71689; Mature: 71689

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQGKLRRSSLKAKLLVSFVIVLILPSIVIGWTSYQQAKTNFNETILQSAEDNVKILNNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCHHHHHHHH
INKEIDSKKVDAVYFTKLFNGVSYGTDQLQNVQNKLEEYNKLHPEIEAIYTGSSTGQFIQ
HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHC
SPSIQMPDGYNPTERDWYKEAAKKSGEVVITAPYKSSTTGNIVITIAKQNEDKSGVLGID
CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEHH
LIINDIVNTSKMVNIGKTGFVAIFDQSKHVIAHPTIKPGDKIEEKVEKELYKQETGDFKF
HHHHHHHCHHHHEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
KLDGDDRNITFITNKQTGWKIAGIMPSKEIIEAANPIFYKTLTVIGISLIIGGVLIYFII
EECCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASIISPLKQLVISSKKISEGDLTETITVHSKDEIGQLGESFNEMAASLHHVISNINTSAS
HHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HVAASSEELTASMKQTSEATEQITQAIEQVSSGAEIQTKEVEEGATLLEEVTEGIQRVAD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
SSSLVSTASMYTKKKAEDGGKLVEQTVNQMQLIHESVSQSDKVIVLLDDKSKQIGAILEV
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
IQHIAEQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGQSSTEIGKLVKEIQFD
HHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IKETVSSMKLVGTEVQSGLVVANETKQSFAEILKSTDDTVVQIDNMVDVAKQMTVDARQV
HHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
SASINEIAATIEENAASVQNIAGSSEEQLASVDEINAAAVHLSQMAEELQEMIGKFKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQGKLRRSSLKAKLLVSFVIVLILPSIVIGWTSYQQAKTNFNETILQSAEDNVKILNNV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHCCCCHHHHHHHH
INKEIDSKKVDAVYFTKLFNGVSYGTDQLQNVQNKLEEYNKLHPEIEAIYTGSSTGQFIQ
HHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHC
SPSIQMPDGYNPTERDWYKEAAKKSGEVVITAPYKSSTTGNIVITIAKQNEDKSGVLGID
CCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEHH
LIINDIVNTSKMVNIGKTGFVAIFDQSKHVIAHPTIKPGDKIEEKVEKELYKQETGDFKF
HHHHHHHCHHHHEECCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
KLDGDDRNITFITNKQTGWKIAGIMPSKEIIEAANPIFYKTLTVIGISLIIGGVLIYFII
EECCCCCEEEEEECCCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASIISPLKQLVISSKKISEGDLTETITVHSKDEIGQLGESFNEMAASLHHVISNINTSAS
HHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
HVAASSEELTASMKQTSEATEQITQAIEQVSSGAEIQTKEVEEGATLLEEVTEGIQRVAD
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHC
SSSLVSTASMYTKKKAEDGGKLVEQTVNQMQLIHESVSQSDKVIVLLDDKSKQIGAILEV
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
IQHIAEQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGQSSTEIGKLVKEIQFD
HHHHHHHCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IKETVSSMKLVGTEVQSGLVVANETKQSFAEILKSTDDTVVQIDNMVDVAKQMTVDARQV
HHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHH
SASINEIAATIEENAASVQNIAGSSEEQLASVDEINAAAVHLSQMAEELQEMIGKFKV
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA