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The map label for this gene is ydbT [H]

Identifier: 227816091

GI number: 227816091

Start: 3198617

End: 3199750

Strand: Reverse

Name: ydbT [H]

Synonym: BAMEG_3517

Alternate gene names: 227816091

Gene position: 3199750-3198617 (Counterclockwise)

Preceding gene: 227816092

Following gene: 227816090

Centisome position: 61.18

GC content: 38.62

Gene sequence:

>1134_bases
TTGAAACAGCTGGCGGGGGGCGATGATGCGGAGGTTAGCTTAGCCGGTATTACAGTAGAAGAGGCAACTGAGCTTATTGC
TTTGCTAAATGAGCCAACTCCAGAAGTGAAAGCAGAAGGAACGCTAGACGAAAAAGCGGAACATGCAATAGAAAAAGAAA
TCGTTACAGAAGAAAAACAAACGACAGAATATAAATTGACTTGGAAAGAAATTTTACTAGCCTCTGTTACATCCGGGCAG
TTTGGACTATTATTCTCGTTAATCTTTTTCGTGTATCACCAAGTAGAGGAATACATTCCGAAATGGATAGAGAATAGCGT
AAAGTCATATGTAATGCAACATGATATATATGGCTGGATTTTCATGGTAGCTATTTTACTCGTCCTTTCGTGGATTATAT
CTACAATCGGTTATGCGCTAAAACATGGAGATTTCACAGTAAATCGAAGAAATGACGAAGTCCGCATTTCACAAGGATTA
CTTGAGAAAAAAGAACTCGTCTTAAAGTTACATCGTATTCAAGGGATTACGATAAAAGAAAGTATTTTACGTCAGCCATT
CGGCTATTGTGCTGTGCAAGTAGAAGTGATTCAAAGTAAGGGAACGAATGATGAAAAAGAAAAAGTTACACTGCATCCAA
TCATCCGAAAAGACCGAGTACAACAGTTACTCGCGCATTTACAACTACCGTACGAACTGAATACAAATATTATTTCATTA
CCAAAAGCAGCATTACGCCGCTATCTCATTGATAGCTTCATCTTTTTCGCAATGATAGCTATCCCGCTTATTGGAATAAG
TATATACTTTGAAAAGCACTTCATCATGTGGGCACTAATTCCGCTCACGATCCTCATCTTTACACTTGGTTACGCAACAT
TTAAAACAAATGGTTACAGTGTAAACGGAGAGCAAATTACACTTGTATATCGCAGCGTCGGAAAATATACAGGACTTATT
AGAAGAAGACACGTCCAATCGATGGAAAAGACGCAATCCTATTTCCAGCGCCGCGCGGATTTATGTACGTATAAGTTTTC
GAGCGCATCATCGAGTTATAAATTAGAGCATACGAGAGTAGAAGATGCGGAGAGAATGCAGAATTGGTATAAGAAGAGAA
TAAGTGAGAATTAA

Upstream 100 bases:

>100_bases
TTTGTGAAGAAGGAGAGCTACTTAAATAAAGAACGTGTTCAAACAATCAATACAAGCTCTAACGTGTTATATCAAATGCT
TGGCTTAAAGAAAATCCAAA

Downstream 100 bases:

>100_bases
GTGGAATGGCTCGTCTTTTGCGGAAGGCGAGTTATTTTTCTATGTAAAAATGATAGGAAATAATGAATAATATATGTGAC
GCAAAAAAAGTGAGGTGAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MKQLAGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTEYKLTWKEILLASVTSGQ
FGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVAILLVLSWIISTIGYALKHGDFTVNRRNDEVRISQGL
LEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTNDEKEKVTLHPIIRKDRVQQLLAHLQLPYELNTNIISL
PKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNGEQITLVYRSVGKYTGLI
RRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN

Sequences:

>Translated_377_residues
MKQLAGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTEYKLTWKEILLASVTSGQ
FGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVAILLVLSWIISTIGYALKHGDFTVNRRNDEVRISQGL
LEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTNDEKEKVTLHPIIRKDRVQQLLAHLQLPYELNTNIISL
PKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNGEQITLVYRSVGKYTGLI
RRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN
>Mature_377_residues
MKQLAGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQTTEYKLTWKEILLASVTSGQ
FGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWIFMVAILLVLSWIISTIGYALKHGDFTVNRRNDEVRISQGL
LEKKELVLKLHRIQGITIKESILRQPFGYCAVQVEVIQSKGTNDEKEKVTLHPIIRKDRVQQLLAHLQLPYELNTNIISL
PKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYSVNGEQITLVYRSVGKYTGLI
RRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRVEDAERMQNWYKKRISEN

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 43528; Mature: 43528

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQLAGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQ
CCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHH
TTEYKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWI
CCHHEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMVAILLVLSWIISTIGYALKHGDFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKE
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
SILRQPFGYCAVQVEVIQSKGTNDEKEKVTLHPIIRKDRVQQLLAHLQLPYELNTNIISL
HHHHCCCCHHHEEEEEECCCCCCCCHHCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEC
PKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEE
VNGEQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRV
ECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHH
EDAERMQNWYKKRISEN
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQLAGGDDAEVSLAGITVEEATELIALLNEPTPEVKAEGTLDEKAEHAIEKEIVTEEKQ
CCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHH
TTEYKLTWKEILLASVTSGQFGLLFSLIFFVYHQVEEYIPKWIENSVKSYVMQHDIYGWI
CCHHEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FMVAILLVLSWIISTIGYALKHGDFTVNRRNDEVRISQGLLEKKELVLKLHRIQGITIKE
HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHH
SILRQPFGYCAVQVEVIQSKGTNDEKEKVTLHPIIRKDRVQQLLAHLQLPYELNTNIISL
HHHHCCCCHHHEEEEEECCCCCCCCHHCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEC
PKAALRRYLIDSFIFFAMIAIPLIGISIYFEKHFIMWALIPLTILIFTLGYATFKTNGYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEE
VNGEQITLVYRSVGKYTGLIRRRHVQSMEKTQSYFQRRADLCTYKFSSASSSYKLEHTRV
ECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHH
EDAERMQNWYKKRISEN
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]