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The map label for this gene is ydbT [H]

Identifier: 227816092

GI number: 227816092

Start: 3199725

End: 3200036

Strand: Reverse

Name: ydbT [H]

Synonym: BAMEG_3518

Alternate gene names: 227816092

Gene position: 3200036-3199725 (Counterclockwise)

Preceding gene: 227816093

Following gene: 227816091

Centisome position: 61.18

GC content: 33.97

Gene sequence:

>312_bases
TTGGAATTAAAAATAAGAGATTTTATACCATTTATTATTTTTCTCCTTAGTTTAAAAGGAAAGTTCCCATTTTGGTATTT
AGTTCCTGTCGGTTTTGCGGTAATCACGATTGTTTCAGCTATCGTAGGCTGGTATTACAAAGTATATTGGATTGAAAATA
ACGTATTACATGTGAAACAAGGTCTCTTTGTGAAGAAGGAGAGCTACTTAAATAAAGAACGTGTTCAAACAATCAATACA
AGCTCTAACGTGTTATATCAAATGCTTGGCTTAAAGAAAATCCAAATTGAAACAGCTGGCGGGGGGCGATGA

Upstream 100 bases:

>100_bases
TTAACGATGTATGAAGCAGAAATGTTGAAAACGAAAATCGCAGAATTAGCGAAAGTGAGTGATGAGGATGTATAAGAGAC
AGCATCCGATCACGATGTTA

Downstream 100 bases:

>100_bases
TGCGGAGGTTAGCTTAGCCGGTATTACAGTAGAAGAGGCAACTGAGCTTATTGCTTTGCTAAATGAGCCAACTCCAGAAG
TGAAAGCAGAAGGAACGCTA

Product: membrane-flanked domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESYLNKERVQTINT
SSNVLYQMLGLKKIQIETAGGGR

Sequences:

>Translated_103_residues
MELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESYLNKERVQTINT
SSNVLYQMLGLKKIQIETAGGGR
>Mature_103_residues
MELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQGLFVKKESYLNKERVQTINT
SSNVLYQMLGLKKIQIETAGGGR

Specific function: Unknown

COG id: COG3428

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0699 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005182
- InterPro:   IPR014529 [H]

Pfam domain/function: PF03703 DUF304 [H]

EC number: NA

Molecular weight: Translated: 11960; Mature: 11960

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQ
CCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECC
GLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGR
CCEEEHHHHCCHHHHHEECCCHHHHHHHHCCEEEEEEECCCCC
>Mature Secondary Structure
MELKIRDFIPFIIFLLSLKGKFPFWYLVPVGFAVITIVSAIVGWYYKVYWIENNVLHVKQ
CCCCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEECC
GLFVKKESYLNKERVQTINTSSNVLYQMLGLKKIQIETAGGGR
CCEEEHHHHCCHHHHHEECCCHHHHHHHHCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]