Click here to switch to the map view.

The map label for this gene is ybaC [H]

Identifier: 227814797

GI number: 227814797

Start: 2007681

End: 2008712

Strand: Reverse

Name: ybaC [H]

Synonym: BAMEG_2207

Alternate gene names: 227814797

Gene position: 2008712-2007681 (Counterclockwise)

Preceding gene: 227814798

Following gene: 227814796

Centisome position: 38.41

GC content: 32.95

Gene sequence:

>1032_bases
ATGAAGAAGATAGCAAAATTAATAAAATTTATTGGTGCCATCACTATACTATTATTAATTGTAGCATTAATATTTCCTAC
ATGGACCTCGCAAATAAAAGGACAAAACAGTATAAGTACATTAGAGAAAGTAGAGATAAATGGAAGTGATCATGAAATTA
TGATACGCGGCAAAGATAAGAACAATCCGGTAATTATTTTTGTACATGGTGGACCAGGTACTTCAGAAATACCATATGCT
CAAAAATATCAAGATTTATTGGAAGAGAAGTTTACAGTTGTTCATTATGATCAAAGAGGAAGCGGGAAATCGTATCATTT
CTTTGAGGACTATTCAAATCTTACATCAGATCTTCTTGTAGAAGATTTATTAGCTATGACAGATTATATTTCAAAACGTC
TTGGTAAAGAAAAGGCAATATTGATTGGCCATTCTTACGGTACATATATCGGAATGCAAGCTGCTAATAAAGCTCCTGAA
AAATATGAAGCGTATGTTGGTATAGGGCAGATGAGTGATACATTAGAAGGTGAGATGGATAGTTTAAAGTTTGTCATAGA
CCAAGCGGAAAATGCAGGCAATAAAGAGGAAGTTTCCTATTTAAATGGATTAACTGAAAAAATTAAAAATGGCGATACAT
ACACTCCGCGGAATTATGTTGGGAAATATGGTGGAACATCAAGACTCATTGAAAATCCAGATGGTGATAACATCGGGATG
TTACTCAGTAATGAATATAACTTGTTAGACGTAATTCGTTATAACGTTGGATTATCACACTCTCAGACTGTCTTATTAGA
AAAAGATTTAAAGAATCCATTACCTACTAAGGTGAAGAAACTGAAGTTACCGTTTTATTTCCTTATGGGGAAATATGACT
ATAATACTTCATTTCATGCGGCAAAAACATATTTTGATACGATTGAAGCAGAGCAAAAAGAATTTATTACTTTTGAAAAA
TCCGCGCATTATCCACAATTTGAAGAGAAGGAAAAGTTTTATGAGTGGATGTGCGATACATTCGTAAAGTAA

Upstream 100 bases:

>100_bases
TGAAATTAGAAATTGCAGTTGATGTACATTCCTATTTTTTAAGGTAGTTTTACAGAACTAAATTGATGTTTTTATAAATT
TAAAAGAAAGGAAACGACTT

Downstream 100 bases:

>100_bases
ATAAAGTGTATCCGAACTATAGAGAATTAAAAAAATTAGCGAGATGTATCGTTACATAAAGCGAAATCAAATAAAAAAGA
CTCTTGTATAAAAAATAAGA

Product: hydrolase, alpha/beta fold family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKKIAKLIKFIGAITILLLIVALIFPTWTSQIKGQNSISTLEKVEINGSDHEIMIRGKDKNNPVIIFVHGGPGTSEIPYA
QKYQDLLEEKFTVVHYDQRGSGKSYHFFEDYSNLTSDLLVEDLLAMTDYISKRLGKEKAILIGHSYGTYIGMQAANKAPE
KYEAYVGIGQMSDTLEGEMDSLKFVIDQAENAGNKEEVSYLNGLTEKIKNGDTYTPRNYVGKYGGTSRLIENPDGDNIGM
LLSNEYNLLDVIRYNVGLSHSQTVLLEKDLKNPLPTKVKKLKLPFYFLMGKYDYNTSFHAAKTYFDTIEAEQKEFITFEK
SAHYPQFEEKEKFYEWMCDTFVK

Sequences:

>Translated_343_residues
MKKIAKLIKFIGAITILLLIVALIFPTWTSQIKGQNSISTLEKVEINGSDHEIMIRGKDKNNPVIIFVHGGPGTSEIPYA
QKYQDLLEEKFTVVHYDQRGSGKSYHFFEDYSNLTSDLLVEDLLAMTDYISKRLGKEKAILIGHSYGTYIGMQAANKAPE
KYEAYVGIGQMSDTLEGEMDSLKFVIDQAENAGNKEEVSYLNGLTEKIKNGDTYTPRNYVGKYGGTSRLIENPDGDNIGM
LLSNEYNLLDVIRYNVGLSHSQTVLLEKDLKNPLPTKVKKLKLPFYFLMGKYDYNTSFHAAKTYFDTIEAEQKEFITFEK
SAHYPQFEEKEKFYEWMCDTFVK
>Mature_343_residues
MKKIAKLIKFIGAITILLLIVALIFPTWTSQIKGQNSISTLEKVEINGSDHEIMIRGKDKNNPVIIFVHGGPGTSEIPYA
QKYQDLLEEKFTVVHYDQRGSGKSYHFFEDYSNLTSDLLVEDLLAMTDYISKRLGKEKAILIGHSYGTYIGMQAANKAPE
KYEAYVGIGQMSDTLEGEMDSLKFVIDQAENAGNKEEVSYLNGLTEKIKNGDTYTPRNYVGKYGGTSRLIENPDGDNIGM
LLSNEYNLLDVIRYNVGLSHSQTVLLEKDLKNPLPTKVKKLKLPFYFLMGKYDYNTSFHAAKTYFDTIEAEQKEFITFEK
SAHYPQFEEKEKFYEWMCDTFVK

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 39093; Mature: 39093

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAKLIKFIGAITILLLIVALIFPTWTSQIKGQNSISTLEKVEINGSDHEIMIRGKDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCEEEEEECCC
NNPVIIFVHGGPGTSEIPYAQKYQDLLEEKFTVVHYDQRGSGKSYHFFEDYSNLTSDLLV
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
EDLLAMTDYISKRLGKEKAILIGHSYGTYIGMQAANKAPEKYEAYVGIGQMSDTLEGEMD
HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHCCCCCHHHHHHEECCCCCHHHCCHHH
SLKFVIDQAENAGNKEEVSYLNGLTEKIKNGDTYTPRNYVGKYGGTSRLIENPDGDNIGM
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE
LLSNEYNLLDVIRYNVGLSHSQTVLLEKDLKNPLPTKVKKLKLPFYFLMGKYDYNTSFHA
EECCCCCHHHHHHHHCCCCCCCEEEEEHHCCCCCCCHHHHHCCCEEEEEEEECCCCCHHH
AKTYFDTIEAEQKEFITFEKSAHYPQFEEKEKFYEWMCDTFVK
HHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIAKLIKFIGAITILLLIVALIFPTWTSQIKGQNSISTLEKVEINGSDHEIMIRGKDK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEEECCCCCEEEEEECCC
NNPVIIFVHGGPGTSEIPYAQKYQDLLEEKFTVVHYDQRGSGKSYHFFEDYSNLTSDLLV
CCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHH
EDLLAMTDYISKRLGKEKAILIGHSYGTYIGMQAANKAPEKYEAYVGIGQMSDTLEGEMD
HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEHHHCCCCCHHHHHHEECCCCCHHHCCHHH
SLKFVIDQAENAGNKEEVSYLNGLTEKIKNGDTYTPRNYVGKYGGTSRLIENPDGDNIGM
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEE
LLSNEYNLLDVIRYNVGLSHSQTVLLEKDLKNPLPTKVKKLKLPFYFLMGKYDYNTSFHA
EECCCCCHHHHHHHHCCCCCCCEEEEEHHCCCCCCCHHHHHCCCEEEEEEEECCCCCHHH
AKTYFDTIEAEQKEFITFEKSAHYPQFEEKEKFYEWMCDTFVK
HHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]