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The map label for this gene is ykuC [H]

Identifier: 227814796

GI number: 227814796

Start: 2006198

End: 2007460

Strand: Reverse

Name: ykuC [H]

Synonym: BAMEG_2206

Alternate gene names: 227814796

Gene position: 2007460-2006198 (Counterclockwise)

Preceding gene: 227814797

Following gene: 227814795

Centisome position: 38.38

GC content: 33.57

Gene sequence:

>1263_bases
ATGAAAGAAATGCTACAGTTATTTCGCAACAAAGTGTATGCACGTTTTTTTCTAGCAAATATTTTAGAGCGACTCGGTTC
TATGATTGCTGGAGTTTCTTTAATGTTTTATTTGCTAGATCAATACGGAAAACAACCAGTTTACGCAACAATGACACAAA
TTATGATTGCATTACCTGCATTAATCTTTTTTCTATTAGTAGGGACAGTAGTGGATCGTTTTGATAGACAACGTATTTGT
ACAGTAAGTAACATATGTTGTTCACTCTGTAATATCGGAATTCTAATTTCGCTTTATTACGGGATGATTATACTTGTCTT
TCTATTTTTATTTTTAGAAAATGCATGTATACAATTTTTCTCTCCATCAGAACAGTCGATGATACAGGGAGTAGTTGAAT
CAGACCAATATGGTGCAGCAGCGGGGATTAATCAAATGGTAAATAGTTTGTATGCCTTGTTTGGTGTAGGAATTGCAACG
ATGGTGTACTGGACTTTTGGAATTTACGGGAGCATTTTAGTAAATACGCTCACATTTATTATGAGTGGTATTTTGATTCA
AACGATCTCCATTCCAGAAAAAGTTCGTTTGCCAAATGGTAGAACAAAATGGAAAGAAGTTAATTTAAAAATGTTAATAA
CAGAGTTTAAAGAAGGGATTAGGTATATATACCAAAATGAAACTTTAAAAAAATTACTTTTAGGATTTATCGTATTTGGA
CTATTAAATGGTATTTTAAGCGTATCTACTACTTACATATTAAAATACAAATTAGCACCAGCTACGTATGAAAGTTTAGC
AATGGTAGGCGGTGTAGTTGGAGGGATTTCATTACTAATTGGAAGTATAGTAGCAACGAGTATAGGTAAGAAATATGCGC
CAAAACCTATTATAGTTTTTGGTATGGCGGGCTCAGGGATCTTTTTCGGTATGTGTTACTTTGTAAATTACGTATGGTCT
TTTTATGTATGTATTGCTTTTGCGACTTTCTTTTTACCGTTTATTAATGTTGCAATAATGGGCTGGATGTATGAAATTGT
AGAAGAGTCATTTATGGGGCGCGTTCAAAGTTTACTTAGTCCATTAACGACAGGATTCCAGCTTTTATCTCTCGGTGCGA
TAGCAATGTTATTCCCGAAATGGATTCGTGCAGATACATTGTATATCATTTTATTTGGTTTATTACTTTTTGTTACATGT
TTATATCAAGCTATTCTACCTAGTGGGCAAAAGCGAGTACATGTTGTCGCTAAAGAAATGTGA

Upstream 100 bases:

>100_bases
TATACAGAAGGAAAATATTGGATAATAGTCGAAAAATATAATATAACTTCCAAGAAATGACTAGAATAATAAAATTTTGT
CGAAAGAAAGGATACGAAGT

Downstream 100 bases:

>100_bases
TATATTTAGTTTTTTATTTCTGAATATTCTATCGAATAGTAAGGGGAAATCGTTATGTTGATGCGAATGGTTAAGTGGTG
TGGGATTACTGGTTTACAAC

Product: putative ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKEMLQLFRNKVYARFFLANILERLGSMIAGVSLMFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRIC
TVSNICCSLCNIGILISLYYGMIILVFLFLFLENACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIAT
MVYWTFGIYGSILVNTLTFIMSGILIQTISIPEKVRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFG
LLNGILSVSTTYILKYKLAPATYESLAMVGGVVGGISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWS
FYVCIAFATFFLPFINVAIMGWMYEIVEESFMGRVQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTC
LYQAILPSGQKRVHVVAKEM

Sequences:

>Translated_420_residues
MKEMLQLFRNKVYARFFLANILERLGSMIAGVSLMFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRIC
TVSNICCSLCNIGILISLYYGMIILVFLFLFLENACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIAT
MVYWTFGIYGSILVNTLTFIMSGILIQTISIPEKVRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFG
LLNGILSVSTTYILKYKLAPATYESLAMVGGVVGGISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWS
FYVCIAFATFFLPFINVAIMGWMYEIVEESFMGRVQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTC
LYQAILPSGQKRVHVVAKEM
>Mature_420_residues
MKEMLQLFRNKVYARFFLANILERLGSMIAGVSLMFYLLDQYGKQPVYATMTQIMIALPALIFFLLVGTVVDRFDRQRIC
TVSNICCSLCNIGILISLYYGMIILVFLFLFLENACIQFFSPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIAT
MVYWTFGIYGSILVNTLTFIMSGILIQTISIPEKVRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFG
LLNGILSVSTTYILKYKLAPATYESLAMVGGVVGGISLLIGSIVATSIGKKYAPKPIIVFGMAGSGIFFGMCYFVNYVWS
FYVCIAFATFFLPFINVAIMGWMYEIVEESFMGRVQSLLSPLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTC
LYQAILPSGQKRVHVVAKEM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004751
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47048; Mature: 47048

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEMLQLFRNKVYARFFLANILERLGSMIAGVSLMFYLLDQYGKQPVYATMTQIMIALPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LIFFLLVGTVVDRFDRQRICTVSNICCSLCNIGILISLYYGMIILVFLFLFLENACIQFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIATMVYWTFGIYGSILVNTLTFI
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSGILIQTISIPEKVRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFG
HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLNGILSVSTTYILKYKLAPATYESLAMVGGVVGGISLLIGSIVATSIGKKYAPKPIIVF
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
GMAGSGIFFGMCYFVNYVWSFYVCIAFATFFLPFINVAIMGWMYEIVEESFMGRVQSLLS
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTCLYQAILPSGQKRVHVVAKEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
>Mature Secondary Structure
MKEMLQLFRNKVYARFFLANILERLGSMIAGVSLMFYLLDQYGKQPVYATMTQIMIALPA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LIFFLLVGTVVDRFDRQRICTVSNICCSLCNIGILISLYYGMIILVFLFLFLENACIQFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SPSEQSMIQGVVESDQYGAAAGINQMVNSLYALFGVGIATMVYWTFGIYGSILVNTLTFI
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSGILIQTISIPEKVRLPNGRTKWKEVNLKMLITEFKEGIRYIYQNETLKKLLLGFIVFG
HHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LLNGILSVSTTYILKYKLAPATYESLAMVGGVVGGISLLIGSIVATSIGKKYAPKPIIVF
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
GMAGSGIFFGMCYFVNYVWSFYVCIAFATFFLPFINVAIMGWMYEIVEESFMGRVQSLLS
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLTTGFQLLSLGAIAMLFPKWIRADTLYIILFGLLLFVTCLYQAILPSGQKRVHVVAKEM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]