| Definition | Bacillus anthracis str. CDC 684, complete genome. |
|---|---|
| Accession | NC_012581 |
| Length | 5,230,115 |
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The map label for this gene is acoL [H]
Identifier: 227814415
GI number: 227814415
Start: 1658242
End: 1659621
Strand: Direct
Name: acoL [H]
Synonym: BAMEG_1823
Alternate gene names: 227814415
Gene position: 1658242-1659621 (Clockwise)
Preceding gene: 227814414
Following gene: 227814417
Centisome position: 31.71
GC content: 37.97
Gene sequence:
>1380_bases ATGAGTAAATTAGTCGTTATTGGAGGCGGACCTGCTGGCTATGTAGCGGCAATTACCGCGGCTCAAAATGGAAAAAATGT CACTCTTATTGATGAAGCTGATCTTGGCGGGACTTGTTTAAATGTCGGGTGCATGCCTACAAAATCATTGTTAGAAAGTG CAGAAGTGCATGACATTGTGAGAAAATCGAATCATTATGGAGTTACGCTTAACAATGGAAGTATATCAATCGATTGGAAG CAAATGCAGGTGAGAAAATCGCAAATCGTAACGCAGCTCGTCCAAGGAATTCAATATTTAATGAAGAAAAATAAAATAAA AGTTATACAAGGTAAAGCGAAATTTGAAACGGATCATCGTGTGAGAGTTACATACGGTGATAAAGAAATTGTAGTAGATG GAGAACAGTTCATTATAGCGACAGGTTCAGAACCGACTGAATTACCTTTTGCTCCATTTGATGGGAAGTGGATTTTAAAT AGTACCCATGCAATGTCTCTAAAAAACATACCGAAATCATTATTAATCGTTGGCGGTGGTGTAATAGGGTGCGAGTTTGC AAGTATTTATAGTCGTCTTGGAACAAAAGTTACAATTGTTGAAATGGCACCGCAATTATTACCAGGTGAAGATGAAGATA TCGCACACATTTTAAGAGGGAAACTAGAAAATGATGGCGTGAAAATATTTACAGGAGCAACTTTAAAAGGATTAAATAGT TATAAGAAGCAGGCTTTATTTGAATATGAAGGAGGTATCCAAGAAGTTAATCCAGAATTTGTTCTCGTTTCTGTCGGCCG AAAACCACGTGTACAACAATTAAACTTAGAAAAAGCAGGCATTCAATATTCAAATAAAGGAATTTCTGTGAATGAACATA TGCAAACCAATGTATCACATATTTACGCAGCAGGTGATGTGATTGGTGGAATCCAGCTTGCTCACGTTGCATTCCATGAA GGAACGACGGCAGCATTATACGCGAGTGGAGAAGATGTAAAAGTAAACTACCATGCTGTACCTCGCTGTATTTATACCGC TCCAGAAATTGCTAGCGTCGGTTTAACAGAAAAAGATGCAAAAGAGCAGTACGGTGACATACAAATTGGCGAATTTCCTT TTACAGCGAATGGAAAAGCGCTTATTATTGGAGAACAAACGGGGAAAGTAAAAGTTATTGTGGAACCTAAATATCAAGAA ATTGTTGGAATTTCTATTATTGGTCCTCGCGCAACAGAACTAATTGGTCAAGGAACTGTAATGATTCATACGGAAGTTAC CGCTGATATTATGAGAGATTATATTGCAGCGCATCCAACTTTATCTGAATCGATTCATGAAGCTTTATTGCAAGCTGTAG GGCATGCTGTACATGCTTAA
Upstream 100 bases:
>100_bases TCGTGTACTAGACGGTGCACCAGCAGCTGCATTTTTACGCACAATTAAACGCTATTTAGAAGAACCTGTAACAATTCTTT TATAAAGAGAAGGTGAGAGA
Downstream 100 bases:
>100_bases ATGGAATTATAATAAACCACTATTTTCTAAATGAATAAGAGAATAGTGGTTTGAATTTTTACGGAAGAAATTGAATATCC TATTATTTTTTTACGTCAAT
Product: dihydrolipoamide dehydrogenase
Products: NA
Alternate protein names: Dihydrolipoamide dehydrogenase; E3 component of acetoin cleaving system [H]
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIVRKSNHYGVTLNNGSISIDWK QMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKAKFETDHRVRVTYGDKEIVVDGEQFIIATGSEPTELPFAPFDGKWILN STHAMSLKNIPKSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLPGEDEDIAHILRGKLENDGVKIFTGATLKGLNS YKKQALFEYEGGIQEVNPEFVLVSVGRKPRVQQLNLEKAGIQYSNKGISVNEHMQTNVSHIYAAGDVIGGIQLAHVAFHE GTTAALYASGEDVKVNYHAVPRCIYTAPEIASVGLTEKDAKEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQE IVGISIIGPRATELIGQGTVMIHTEVTADIMRDYIAAHPTLSESIHEALLQAVGHAVHA
Sequences:
>Translated_459_residues MSKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIVRKSNHYGVTLNNGSISIDWK QMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKAKFETDHRVRVTYGDKEIVVDGEQFIIATGSEPTELPFAPFDGKWILN STHAMSLKNIPKSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLPGEDEDIAHILRGKLENDGVKIFTGATLKGLNS YKKQALFEYEGGIQEVNPEFVLVSVGRKPRVQQLNLEKAGIQYSNKGISVNEHMQTNVSHIYAAGDVIGGIQLAHVAFHE GTTAALYASGEDVKVNYHAVPRCIYTAPEIASVGLTEKDAKEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQE IVGISIIGPRATELIGQGTVMIHTEVTADIMRDYIAAHPTLSESIHEALLQAVGHAVHA >Mature_458_residues SKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIVRKSNHYGVTLNNGSISIDWKQ MQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKAKFETDHRVRVTYGDKEIVVDGEQFIIATGSEPTELPFAPFDGKWILNS THAMSLKNIPKSLLIVGGGVIGCEFASIYSRLGTKVTIVEMAPQLLPGEDEDIAHILRGKLENDGVKIFTGATLKGLNSY KKQALFEYEGGIQEVNPEFVLVSVGRKPRVQQLNLEKAGIQYSNKGISVNEHMQTNVSHIYAAGDVIGGIQLAHVAFHEG TTAALYASGEDVKVNYHAVPRCIYTAPEIASVGLTEKDAKEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQEI VGISIIGPRATELIGQGTVMIHTEVTADIMRDYIAAHPTLSESIHEALLQAVGHAVHA
Specific function: Lipoamide Dehydrogenase Is A Component Of The Glycine Cleavage System As Well As Of The Alpha-Ketoacid Dehydrogenase Complexes. [C]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=460, Percent_Identity=35.6521739130435, Blast_Score=265, Evalue=7e-71, Organism=Homo sapiens, GI50301238, Length=448, Percent_Identity=28.7946428571429, Blast_Score=166, Evalue=4e-41, Organism=Homo sapiens, GI148277065, Length=459, Percent_Identity=27.6688453159041, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI33519430, Length=451, Percent_Identity=27.9379157427938, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI33519428, Length=451, Percent_Identity=27.9379157427938, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI33519426, Length=451, Percent_Identity=27.9379157427938, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI148277071, Length=467, Percent_Identity=27.6231263383298, Blast_Score=149, Evalue=8e-36, Organism=Homo sapiens, GI22035672, Length=458, Percent_Identity=28.3842794759825, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI291045266, Length=458, Percent_Identity=26.6375545851528, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI291045268, Length=449, Percent_Identity=24.7216035634744, Blast_Score=115, Evalue=7e-26, Organism=Escherichia coli, GI1786307, Length=449, Percent_Identity=33.8530066815145, Blast_Score=268, Evalue=4e-73, Organism=Escherichia coli, GI87081717, Length=451, Percent_Identity=31.7073170731707, Blast_Score=207, Evalue=8e-55, Organism=Escherichia coli, GI87082354, Length=456, Percent_Identity=27.4122807017544, Blast_Score=177, Evalue=1e-45, Organism=Escherichia coli, GI1789915, Length=435, Percent_Identity=28.2758620689655, Blast_Score=168, Evalue=5e-43, Organism=Caenorhabditis elegans, GI32565766, Length=466, Percent_Identity=37.3390557939914, Blast_Score=273, Evalue=1e-73, Organism=Caenorhabditis elegans, GI17557007, Length=472, Percent_Identity=27.3305084745763, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI71983429, Length=442, Percent_Identity=26.0180995475113, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71983419, Length=442, Percent_Identity=26.0180995475113, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71982272, Length=481, Percent_Identity=26.1954261954262, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17559934, Length=223, Percent_Identity=29.5964125560538, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321091, Length=472, Percent_Identity=38.3474576271186, Blast_Score=277, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6325240, Length=480, Percent_Identity=26.6666666666667, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6325166, Length=449, Percent_Identity=26.9487750556793, Blast_Score=158, Evalue=2e-39, Organism=Drosophila melanogaster, GI21358499, Length=459, Percent_Identity=37.2549019607843, Blast_Score=271, Evalue=9e-73, Organism=Drosophila melanogaster, GI24640553, Length=468, Percent_Identity=28.2051282051282, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI24640549, Length=468, Percent_Identity=28.2051282051282, Blast_Score=154, Evalue=9e-38, Organism=Drosophila melanogaster, GI24640551, Length=468, Percent_Identity=28.2051282051282, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI17737741, Length=467, Percent_Identity=27.8372591006424, Blast_Score=144, Evalue=1e-34,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 6,000 Molecules/Cell In: Glucose minimal
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR006258 - InterPro: IPR004099 - InterPro: IPR012999 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.4 [H]
Molecular weight: Translated: 49563; Mature: 49431
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: PS00076 PYRIDINE_REDOX_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIV CCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH RKSNHYGVTLNNGSISIDWKQMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKAKFETDHR HCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCE VRVTYGDKEIVVDGEQFIIATGSEPTELPFAPFDGKWILNSTHAMSLKNIPKSLLIVGGG EEEEECCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCEEHHHCCCCEEEEECCC VIGCEFASIYSRLGTKVTIVEMAPQLLPGEDEDIAHILRGKLENDGVKIFTGATLKGLNS EEEHHHHHHHHHHCCEEEEEECCHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHH YKKQALFEYEGGIQEVNPEFVLVSVGRKPRVQQLNLEKAGIQYSNKGISVNEHMQTNVSH HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEECCHHHCCEECCCCCCCCHHHHCCCCE IYAAGDVIGGIQLAHVAFHEGTTAALYASGEDVKVNYHAVPRCIYTAPEIASVGLTEKDA EEECCCHHCCEEEEEEEEECCCEEEEEECCCEEEEEEEECCEEEECCCCHHHCCCCCHHH KEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQEIVGISIIGPRATELIGQGTV HHHCCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCHHHEEEEEEECCCHHHHHCCCEE MIHTEVTADIMRDYIAAHPTLSESIHEALLQAVGHAVHA EEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SKLVVIGGGPAGYVAAITAAQNGKNVTLIDEADLGGTCLNVGCMPTKSLLESAEVHDIV CEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHH RKSNHYGVTLNNGSISIDWKQMQVRKSQIVTQLVQGIQYLMKKNKIKVIQGKAKFETDHR HCCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCE VRVTYGDKEIVVDGEQFIIATGSEPTELPFAPFDGKWILNSTHAMSLKNIPKSLLIVGGG EEEEECCEEEEEECCEEEEEECCCCCCCCCCCCCCEEEECCCCEEHHHCCCCEEEEECCC VIGCEFASIYSRLGTKVTIVEMAPQLLPGEDEDIAHILRGKLENDGVKIFTGATLKGLNS EEEHHHHHHHHHHCCEEEEEECCHHHCCCCCHHHHHHHHCCCCCCCEEEEECCCHHHHHH YKKQALFEYEGGIQEVNPEFVLVSVGRKPRVQQLNLEKAGIQYSNKGISVNEHMQTNVSH HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEECCHHHCCEECCCCCCCCHHHHCCCCE IYAAGDVIGGIQLAHVAFHEGTTAALYASGEDVKVNYHAVPRCIYTAPEIASVGLTEKDA EEECCCHHCCEEEEEEEEECCCEEEEEECCCEEEEEEEECCEEEECCCCHHHCCCCCHHH KEQYGDIQIGEFPFTANGKALIIGEQTGKVKVIVEPKYQEIVGISIIGPRATELIGQGTV HHHCCCEEECCCCCCCCCCEEEEECCCCEEEEEECCCHHHEEEEEEECCCHHHHHCCCEE MIHTEVTADIMRDYIAAHPTLSESIHEALLQAVGHAVHA EEEECHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10368162; 8969503; 9384377 [H]