Click here to switch to the map view.

The map label for this gene is ybcI [H]

Identifier: 227814020

GI number: 227814020

Start: 1305847

End: 1306209

Strand: Direct

Name: ybcI [H]

Synonym: BAMEG_1427

Alternate gene names: 227814020

Gene position: 1305847-1306209 (Clockwise)

Preceding gene: 227814018

Following gene: 227814021

Centisome position: 24.97

GC content: 34.44

Gene sequence:

>363_bases
ATGAAAAACTCAAAAGGCTCTATTGAGTCAGAGATAAGTAAAGCAATTACGCACTGGGAAAAGGACTACCTAGGACGCGG
GTCTATATCCGTTAAGACAGATATATTACGGGATATGATTATCGTAAATTTACAAGGTATTTTAACACCGGCTGAATATA
CTGTTTGTGAAACGAAAGACGGTATGCTAACGATAAAGAAAAATCGTTCGGAGCTAGTTGAATCTGGAATTGACGATTTG
AAAGAGATTATATTAGAATTAACTGGAGAAGAAGTGAAAAGTTTTCATACGGATATAAGCTCACGTACTGGTGAACGAGT
AATGATTTTTAAATTGTTTCATAATCTTGAGGAGAAATTTTAA

Upstream 100 bases:

>100_bases
ACAACGATTCCTATAAATTGTTCTCAATAATTGAAAATAAAATCAATCCAGATTATTATATTGTTATTGTAAATTTATTT
TATTGAAGGAGGATACATAA

Downstream 100 bases:

>100_bases
AAATTAAAACCACTGTAGGGGTAGTGGAAGATACACTAAAAATGCAGTGAGGTAATTAAGAAATCTACAAGTTGTGTACT
TTATTTTATCTTATTAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKDGMLTIKKNRSELVESGIDDL
KEIILELTGEEVKSFHTDISSRTGERVMIFKLFHNLEEKF

Sequences:

>Translated_120_residues
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKDGMLTIKKNRSELVESGIDDL
KEIILELTGEEVKSFHTDISSRTGERVMIFKLFHNLEEKF
>Mature_120_residues
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKDGMLTIKKNRSELVESGIDDL
KEIILELTGEEVKSFHTDISSRTGERVMIFKLFHNLEEKF

Specific function: Unknown

COG id: COG5609

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018745 [H]

Pfam domain/function: PF10057 DUF2294 [H]

EC number: NA

Molecular weight: Translated: 13663; Mature: 13663

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKD
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
GMLTIKKNRSELVESGIDDLKEIILELTGEEVKSFHTDISSRTGERVMIFKLFHNLEEKF
CEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNSKGSIESEISKAITHWEKDYLGRGSISVKTDILRDMIIVNLQGILTPAEYTVCETKD
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
GMLTIKKNRSELVESGIDDLKEIILELTGEEVKSFHTDISSRTGERVMIFKLFHNLEEKF
CEEEEECCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]