| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227082228
Identifier: 227082228
GI number: 227082228
Start: 2198394
End: 2198531
Strand: Reverse
Name: 227082228
Synonym: VCM66_2026
Alternate gene names: NA
Gene position: 2198531-2198394 (Counterclockwise)
Preceding gene: 227082230
Following gene: 227082227
Centisome position: 76.01
GC content: 36.96
Gene sequence:
>138_bases ATGCCTAAATGGCATGAATTAAATAAATTTAAGTCATTTTATGCTGGTAATCGCCCGGAATACAATGTGACCCAGTTCCC ATTTTATCTAGGCAACCTTAATGCAAAACGTTACGCGTACTTTTCAGTTCAAGCATAG
Upstream 100 bases:
>100_bases GAGTCACAAACAGGCGCTCAGAGGCTTTGGTAAAACTCTGCTGGTTAACCAGTTCAACGAAGTAGCGTAGGGCGCGGATA TCCATCAAAAGTCTCTTTGT
Downstream 100 bases:
>100_bases CCTACTGATTGTCGTTCAAGTGGCGGCACTTTCACTGATTTGGTTTTTCTCCGATTGGTTGGTCAATCAGTTTCAACTGC CGTTACCCGCCAATTTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MPKWHELNKFKSFYAGNRPEYNVTQFPFYLGNLNAKRYAYFSVQA
Sequences:
>Translated_45_residues MPKWHELNKFKSFYAGNRPEYNVTQFPFYLGNLNAKRYAYFSVQA >Mature_44_residues PKWHELNKFKSFYAGNRPEYNVTQFPFYLGNLNAKRYAYFSVQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5437; Mature: 5306
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKWHELNKFKSFYAGNRPEYNVTQFPFYLGNLNAKRYAYFSVQA CCCCCCHHHHHHHHCCCCCCCCCEECCEEECCCCCCEEEEEEECC >Mature Secondary Structure PKWHELNKFKSFYAGNRPEYNVTQFPFYLGNLNAKRYAYFSVQA CCCCCHHHHHHHHCCCCCCCCCEECCEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA