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The map label for this gene is yfiP [H]

Identifier: 227082107

GI number: 227082107

Start: 2069596

End: 2070198

Strand: Reverse

Name: yfiP [H]

Synonym: VCM66_1904

Alternate gene names: 227082107

Gene position: 2070198-2069596 (Counterclockwise)

Preceding gene: 227082110

Following gene: 227082103

Centisome position: 71.57

GC content: 51.24

Gene sequence:

>603_bases
ATGTCCCGTTATTGTTCCGAGTGTGGTAAAGCGCGTAAAGCGTGCTTGTGTCCGTCCATTGTCGCGCTGGAAAGTGCGGT
TGAGCTTATCATTCTTCAGCACCCAACGGAACAAAAGCGCCCACTCGGTACCGCGCGCATTCTCAGCTTGTCATTGGCCA
ATTGTCGGCTATTGGTGGGCGAAGATTTTCGTGAGCATGACGAGTTAAACCAACTGCTGGCAGAGCCGGATGTGGACTAC
TATGTGCTTTATCCGAATGAACACGCGCAAGAGTGCACAAAGATAAGCCTCACGACAGCGCGCAAAACGCGGGTGATTTT
GCTCGATGGGACGTGGAAAAAAGCCTACAAGATGTGGCAAATCAACACTCAACTGCATGACTTACCGAGCCTACATTTGC
CGGACGAGTGTGTTGGGCATTACCGAATTCGTAAAGCGCCGGATGATACAGCGCTTTCCACAGTGGAGGCGGGTTATCAT
CTGCTCCAGCAGTGGCAACCTGAGCGTGACTTCTCGCCACTGCTCAAGGTGTTTGATGCCATGATTCAATATCAGATCGA
TCAGATGCCGGAAGGCGTTTTCGAGCGAAATTACCGTCAGTAA

Upstream 100 bases:

>100_bases
TGGCGCTGAAGTGCCACAGAGTCAGCTCATGCAGTGGTGGCCACTGCAGACTTAAACTCAACAGGCTTATTGCCAATAAC
AGCAGGTAAAGATTCACGTC

Downstream 100 bases:

>100_bases
TGACTCTGCGCTGAGAAGAGCTGCTGATGCAGTCGCTGCGCGTAAGCATCGGTCATCGCGGCAATGTAATCGCAGATCAC
GCGCATGCCTTCGTCTTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSRYCSECGKARKACLCPSIVALESAVELIILQHPTEQKRPLGTARILSLSLANCRLLVGEDFREHDELNQLLAEPDVDY
YVLYPNEHAQECTKISLTTARKTRVILLDGTWKKAYKMWQINTQLHDLPSLHLPDECVGHYRIRKAPDDTALSTVEAGYH
LLQQWQPERDFSPLLKVFDAMIQYQIDQMPEGVFERNYRQ

Sequences:

>Translated_200_residues
MSRYCSECGKARKACLCPSIVALESAVELIILQHPTEQKRPLGTARILSLSLANCRLLVGEDFREHDELNQLLAEPDVDY
YVLYPNEHAQECTKISLTTARKTRVILLDGTWKKAYKMWQINTQLHDLPSLHLPDECVGHYRIRKAPDDTALSTVEAGYH
LLQQWQPERDFSPLLKVFDAMIQYQIDQMPEGVFERNYRQ
>Mature_199_residues
SRYCSECGKARKACLCPSIVALESAVELIILQHPTEQKRPLGTARILSLSLANCRLLVGEDFREHDELNQLLAEPDVDYY
VLYPNEHAQECTKISLTTARKTRVILLDGTWKKAYKMWQINTQLHDLPSLHLPDECVGHYRIRKAPDDTALSTVEAGYHL
LQQWQPERDFSPLLKVFDAMIQYQIDQMPEGVFERNYRQ

Specific function: Unknown

COG id: COG3148

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTW family [H]

Homologues:

Organism=Homo sapiens, GI27734779, Length=159, Percent_Identity=27.6729559748428, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI87082133, Length=162, Percent_Identity=27.1604938271605, Blast_Score=69, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21358337, Length=192, Percent_Identity=29.1666666666667, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005636 [H]

Pfam domain/function: PF03942 DTW [H]

EC number: NA

Molecular weight: Translated: 23117; Mature: 22986

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRYCSECGKARKACLCPSIVALESAVELIILQHPTEQKRPLGTARILSLSLANCRLLVG
CCHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEC
EDFREHDELNQLLAEPDVDYYVLYPNEHAQECTKISLTTARKTRVILLDGTWKKAYKMWQ
CCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHEEEECCCEEEEEEECCHHHHHHHHE
INTQLHDLPSLHLPDECVGHYRIRKAPDDTALSTVEAGYHLLQQWQPERDFSPLLKVFDA
ECCHHHCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MIQYQIDQMPEGVFERNYRQ
HHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure 
SRYCSECGKARKACLCPSIVALESAVELIILQHPTEQKRPLGTARILSLSLANCRLLVG
CHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHCCEEEEEC
EDFREHDELNQLLAEPDVDYYVLYPNEHAQECTKISLTTARKTRVILLDGTWKKAYKMWQ
CCHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHEEEECCCEEEEEEECCHHHHHHHHE
INTQLHDLPSLHLPDECVGHYRIRKAPDDTALSTVEAGYHLLQQWQPERDFSPLLKVFDA
ECCHHHCCCCCCCCHHHHCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MIQYQIDQMPEGVFERNYRQ
HHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]