Click here to switch to the map view.

The map label for this gene is 227082110

Identifier: 227082110

GI number: 227082110

Start: 2070829

End: 2072676

Strand: Reverse

Name: 227082110

Synonym: VCM66_1907

Alternate gene names: NA

Gene position: 2072676-2070829 (Counterclockwise)

Preceding gene: 227082111

Following gene: 227082107

Centisome position: 71.66

GC content: 48.59

Gene sequence:

>1848_bases
ATGTCTGCGACACATTACCTCAATCAACTTAACCACCGTTATCTGAACATCCATCGTGTCAAAGAAGATTTCTTCTGGGA
TACCTACATGGGGCTGAGTTATGATCATGTGGGTTCCGCGCAAGCACAAACCGAGTGGACTCAGTTTCTGAGCAATGGTG
CGCGGATTGAGGAAATTCGCCAGCAAATCGAATTGGCAGAACAGATCACCGATAGCGAAGAAAAAGCGCAAACCTTAACG
GGCTTACAAGGCTGGCTCGCGATGTTTGAAAGTCATGCGCTGGAATCAGAGCAAGCGCAGTCACTCAAAGCCGGATTAAT
CCAATTTGAGGCCGATCTGTTTGAGAAAAAACAGAAGCATGTGCTGACTTATACCAACGAACAGGGCGAAGCGGTAGAAG
CCTCGATTGTCACTTTAGGTTCCACGGTGCGTACTCATGATCAAGAAGCAGTACGTCGCAGCGCCCATCAGGCTTTCTTA
GGCTTAGAACAGTGGTTATTACAAAATGGATTGTTAGAGCTGGTGAAGCGTCGTAACCATTTTGCGCGCAGCTTAGGTTA
TAAAACCTTTTTTGATTACTCGGTTGCCAAAAAAGAGAAGATGACCACTGAGCAACTGTTCACCATTTTGGATGATTTTG
AACAGCGCACGCGTGATCGTCACTTCACTAGCTTAGCGGAACTTGCACAAAGTAAAGGTGAGCAAGCGCTGCAAGGACAT
AACTTCATCTATTCGTTTGCGGGCGATGTGATGCGTGAGCTGGACCCTTACGTGCCATTTTCACAATCGCTGCGTCGTTG
GGTGGAGTCTTTTGGTCGCCTCAATATTGAATTTAGTGGCGCTGAGCTGACCCTTGATTTGCTGGATCGTAAAGGTAAAT
ATCCAAACGGTTTCTGCCATGGGCCAATTCCGGCGTTTTACGACCAAGGTCAGTGGGTCGCGGCGAAAGTTAATTTCACC
AGTAATGCTAAGCCAGATCAGGTAGGCAGTGGTTACGATGGCATCAACACCTTGTTCCATGAAGGTGGGCACGCGGCGCA
CTTTGCGAATGTGAAGATGAACGCGCCGTGTTTTTCACAAGAATTTGCACCCACTTCGATGGCGTACGCTGAAACGCAAT
CCATGTTTTGCGATAGTCTATTGATGGATGCTGACTGGTTGAAAACCTATGCCAAAGATGTACAAGGTAACCCAGTGCCA
GATGAGCTCATCAAAGCCATGGTATTTAGCCGCCAACCGTTTAAAGCTTACGAAGAGCGCAGTATTTTGCTCGTGCCGTA
TTTTGAGCGAGCACTGTATGAACTGAGCGAGGAAGAGCTGACTGCAGAGCGCGTCACTGAACTGGCCAGAGCCACTGAAA
AGCGGATTATCGGCCTTGAATGCAGTCCGCGTCCGCTGATGGCGATCCCGCATCTGTTATCCGATGAATCGGCGTGTGCT
TATCACGGTTACTTGTTGGCGCACATGGCGGTGTACCAAACTCGCGCTTATTTCCTTGGGCAGTTTGGTTATTTCACCGA
TAACCCAGCGATTGGGCCACTACTGGCGAAGCATTATTGGCAGCAAGGCAATGCACTTTCTCACAATGACACTATTGTGA
ACCTCACTGGTGAAGGCTTTAATGCTCGCTATCTTGCCGATGCCTGTAACTTAACTCCGGATGAAGCATGGCAAAAGCAG
CAGCACAAAATGGCGCAATTGGCGACGCGTGAGCAAACCAAACCCGCTTCATTAAATGCGCAGATTCGAGTGATTGATGG
CGCCACTGAGCTGGCTTCTAACCGTGATTCGGATGAAGAGATGTGCCGCCAATTTGAGGCGTACATTGCCAAACATTACG
GTTGCTAA

Upstream 100 bases:

>100_bases
AGTGCCTACTCGCATCGCGCAGCATCGTGCGATAATGCGCCTTCATCGACTCTTCTAATCTAGGCAAGAAGAGCAAGGAA
AATCATCAATAAGGATTGTT

Downstream 100 bases:

>100_bases
TTAGGCTGTTAATGAAACACACGTACTGAAAAATAAAAAGGCTGAACGCATAGCGTTCGGCCTTTTTTATCCTGTTTATT
GCGATAGTTTACGCTGCAAG

Product: putative peptidase

Products: NA

Alternate protein names: Peptidase M3A And M3B Thimet/Oligopeptidase F; Peptidase; M3 Family Peptidase

Number of amino acids: Translated: 615; Mature: 614

Protein sequence:

>615_residues
MSATHYLNQLNHRYLNIHRVKEDFFWDTYMGLSYDHVGSAQAQTEWTQFLSNGARIEEIRQQIELAEQITDSEEKAQTLT
GLQGWLAMFESHALESEQAQSLKAGLIQFEADLFEKKQKHVLTYTNEQGEAVEASIVTLGSTVRTHDQEAVRRSAHQAFL
GLEQWLLQNGLLELVKRRNHFARSLGYKTFFDYSVAKKEKMTTEQLFTILDDFEQRTRDRHFTSLAELAQSKGEQALQGH
NFIYSFAGDVMRELDPYVPFSQSLRRWVESFGRLNIEFSGAELTLDLLDRKGKYPNGFCHGPIPAFYDQGQWVAAKVNFT
SNAKPDQVGSGYDGINTLFHEGGHAAHFANVKMNAPCFSQEFAPTSMAYAETQSMFCDSLLMDADWLKTYAKDVQGNPVP
DELIKAMVFSRQPFKAYEERSILLVPYFERALYELSEEELTAERVTELARATEKRIIGLECSPRPLMAIPHLLSDESACA
YHGYLLAHMAVYQTRAYFLGQFGYFTDNPAIGPLLAKHYWQQGNALSHNDTIVNLTGEGFNARYLADACNLTPDEAWQKQ
QHKMAQLATREQTKPASLNAQIRVIDGATELASNRDSDEEMCRQFEAYIAKHYGC

Sequences:

>Translated_615_residues
MSATHYLNQLNHRYLNIHRVKEDFFWDTYMGLSYDHVGSAQAQTEWTQFLSNGARIEEIRQQIELAEQITDSEEKAQTLT
GLQGWLAMFESHALESEQAQSLKAGLIQFEADLFEKKQKHVLTYTNEQGEAVEASIVTLGSTVRTHDQEAVRRSAHQAFL
GLEQWLLQNGLLELVKRRNHFARSLGYKTFFDYSVAKKEKMTTEQLFTILDDFEQRTRDRHFTSLAELAQSKGEQALQGH
NFIYSFAGDVMRELDPYVPFSQSLRRWVESFGRLNIEFSGAELTLDLLDRKGKYPNGFCHGPIPAFYDQGQWVAAKVNFT
SNAKPDQVGSGYDGINTLFHEGGHAAHFANVKMNAPCFSQEFAPTSMAYAETQSMFCDSLLMDADWLKTYAKDVQGNPVP
DELIKAMVFSRQPFKAYEERSILLVPYFERALYELSEEELTAERVTELARATEKRIIGLECSPRPLMAIPHLLSDESACA
YHGYLLAHMAVYQTRAYFLGQFGYFTDNPAIGPLLAKHYWQQGNALSHNDTIVNLTGEGFNARYLADACNLTPDEAWQKQ
QHKMAQLATREQTKPASLNAQIRVIDGATELASNRDSDEEMCRQFEAYIAKHYGC
>Mature_614_residues
SATHYLNQLNHRYLNIHRVKEDFFWDTYMGLSYDHVGSAQAQTEWTQFLSNGARIEEIRQQIELAEQITDSEEKAQTLTG
LQGWLAMFESHALESEQAQSLKAGLIQFEADLFEKKQKHVLTYTNEQGEAVEASIVTLGSTVRTHDQEAVRRSAHQAFLG
LEQWLLQNGLLELVKRRNHFARSLGYKTFFDYSVAKKEKMTTEQLFTILDDFEQRTRDRHFTSLAELAQSKGEQALQGHN
FIYSFAGDVMRELDPYVPFSQSLRRWVESFGRLNIEFSGAELTLDLLDRKGKYPNGFCHGPIPAFYDQGQWVAAKVNFTS
NAKPDQVGSGYDGINTLFHEGGHAAHFANVKMNAPCFSQEFAPTSMAYAETQSMFCDSLLMDADWLKTYAKDVQGNPVPD
ELIKAMVFSRQPFKAYEERSILLVPYFERALYELSEEELTAERVTELARATEKRIIGLECSPRPLMAIPHLLSDESACAY
HGYLLAHMAVYQTRAYFLGQFGYFTDNPAIGPLLAKHYWQQGNALSHNDTIVNLTGEGFNARYLADACNLTPDEAWQKQQ
HKMAQLATREQTKPASLNAQIRVIDGATELASNRDSDEEMCRQFEAYIAKHYGC

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70015; Mature: 69884

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATHYLNQLNHRYLNIHRVKEDFFWDTYMGLSYDHVGSAQAQTEWTQFLSNGARIEEIR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
QQIELAEQITDSEEKAQTLTGLQGWLAMFESHALESEQAQSLKAGLIQFEADLFEKKQKH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VLTYTNEQGEAVEASIVTLGSTVRTHDQEAVRRSAHQAFLGLEQWLLQNGLLELVKRRNH
EEEEECCCCCCHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARSLGYKTFFDYSVAKKEKMTTEQLFTILDDFEQRTRDRHFTSLAELAQSKGEQALQGH
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
NFIYSFAGDVMRELDPYVPFSQSLRRWVESFGRLNIEFSGAELTLDLLDRKGKYPNGFCH
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCEEEHHHHHCCCCCCCCCCC
GPIPAFYDQGQWVAAKVNFTSNAKPDQVGSGYDGINTLFHEGGHAAHFANVKMNAPCFSQ
CCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECEEECCCCCCC
EFAPTSMAYAETQSMFCDSLLMDADWLKTYAKDVQGNPVPDELIKAMVFSRQPFKAYEER
CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCC
SILLVPYFERALYELSEEELTAERVTELARATEKRIIGLECSPRPLMAIPHLLSDESACA
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCHH
YHGYLLAHMAVYQTRAYFLGQFGYFTDNPAIGPLLAKHYWQQGNALSHNDTIVNLTGEGF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCC
NARYLADACNLTPDEAWQKQQHKMAQLATREQTKPASLNAQIRVIDGATELASNRDSDEE
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHCCCCCHHH
MCRQFEAYIAKHYGC
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SATHYLNQLNHRYLNIHRVKEDFFWDTYMGLSYDHVGSAQAQTEWTQFLSNGARIEEIR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHH
QQIELAEQITDSEEKAQTLTGLQGWLAMFESHALESEQAQSLKAGLIQFEADLFEKKQKH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
VLTYTNEQGEAVEASIVTLGSTVRTHDQEAVRRSAHQAFLGLEQWLLQNGLLELVKRRNH
EEEEECCCCCCHHHHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARSLGYKTFFDYSVAKKEKMTTEQLFTILDDFEQRTRDRHFTSLAELAQSKGEQALQGH
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCC
NFIYSFAGDVMRELDPYVPFSQSLRRWVESFGRLNIEFSGAELTLDLLDRKGKYPNGFCH
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCEEEEECCCEEEHHHHHCCCCCCCCCCC
GPIPAFYDQGQWVAAKVNFTSNAKPDQVGSGYDGINTLFHEGGHAAHFANVKMNAPCFSQ
CCCCCHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCEEEEECEEECCCCCCC
EFAPTSMAYAETQSMFCDSLLMDADWLKTYAKDVQGNPVPDELIKAMVFSRQPFKAYEER
CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHCCC
SILLVPYFERALYELSEEELTAERVTELARATEKRIIGLECSPRPLMAIPHLLSDESACA
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHCCCCCHH
YHGYLLAHMAVYQTRAYFLGQFGYFTDNPAIGPLLAKHYWQQGNALSHNDTIVNLTGEGF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCC
NARYLADACNLTPDEAWQKQQHKMAQLATREQTKPASLNAQIRVIDGATELASNRDSDEE
CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHCCCCCHHH
MCRQFEAYIAKHYGC
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA