Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is pvcA

Identifier: 227082079

GI number: 227082079

Start: 2035451

End: 2037277

Strand: Direct

Name: pvcA

Synonym: VCM66_1873

Alternate gene names: NA

Gene position: 2035451-2037277 (Clockwise)

Preceding gene: 227082078

Following gene: 227082087

Centisome position: 70.37

GC content: 44.39

Gene sequence:

>1827_bases
ATGCTCGATGCTCAACAAGAAACCTATGTAGAGAAGATCTCATTTATTCTTCTAAATCAACTAATTGCACAATGCAATGC
CAGTTACAACGGGCTTGCTCACTTAAAAAGTCAAATTCGTAGATTTGTAAATAGCCAAGAGAAAATTAAATTACTCCTCC
CCGCTTTCCCCTGTAAAACAAATAACTTAGATAAAGTACTTAGCCATACACCCGATCTCGGTGAATATGTCGTTTTAAGA
AAGTTTGTTCAATGCATCCGTGACATTGAATCCGTTTATGAACCGGGTGTGACGTTTTATATCTTTTCTGACTATCATAC
ATTCTCTGATTATATCTCTGTCGACTTAGACCACCATTATGATTACTCAGACAATCTGCGTAAAATGGTAGCAAACATGA
ATTGCAGCGATGCGTTAAAAATTGTCAATTTCGAACATTTTGATGAATTTTCCGATCTGAAAGACACGGAATATTTTGAT
GGATTACGTGAGAAGTTTGGTGATCCTGACTATGCAGAGAATTTCACTGAACTTAAATTAAAAAATAATAAGATGAATCA
AACCTATCTGGGTTTGAAAAAATTCATGAATCAGGATCAGAAATTCGTTCTTGCTCCTCTCTCATACAAAGATCGCCGAC
GTCGCCTTGCGGATATCGCTAAGGGGATGATGGTGCAAGGCAAAGCGCTGGATAACTTCTTGCAGCAAAAATTTGCCGAT
TGCATTCGATTAAGCATTCATGAACATCCGATGATAGGTAAGAAATACTCGCTGTTTCTGTTCCATGAACGCCAATTCAA
AACGCCTTGGCACAGTACTTTGCTGTTTGATGCCAGCCGCGGCGAATTCATTATTGATAGTAAAGAAAATCACTTAAAAC
GTTCTGGGGTGATCTTGCCTGTCACTCATGATGGTAAGCCTTGGTGTTACCTGCAATTGAGCGCAGCCGATGAAGTGCAC
GCCCATGCGCTGCGCCAAATACGGGCAGAATTACAACATGAAAAATCGGGGTTGTATTTAGAGTGCCCAGCCAATCGCGC
TTCACTGGATATGCTACTTCCCAAAGAGCTCAGCCAACTGGTCAAAGAATTTGGCTCGGTTTTGCTGCGCGGTTTTGCAC
CACTGGCTGACGCTGAACAGCTACAAACTTGGTACCTCAATCACCGTTCTGCTGTCACTTGGGCTTATGAGGTTAGCGTA
CAAGCCTTCAAAGGCAGTGCTGGTGAGCAACCTTTACATTGGGAGCTCTCCTGCCCACCCGCTTATATGGCCGTACACCC
ACATCGCTATCAATATGAAGATTACACCCCCCATGAGTACGCCGTTTACAGCGTTGCATCACCAGACTCGAATACTTGGA
CCGTGGTTGACGCTGCACTCGCCGTCCTGACCATCAACGGTCAAGAGCGCGAACAGCTGCGTAACACCATCATGCACTAC
AGCAACTTTTCACCTGAACATGGCGGGAATACTTTACACCCCCTCGTCCGTTACTGTTCGACATCACGCCAAGATGTGCT
GCGTTGGCAAGATTTTCAGCATGCGCAGGGCTACCTCACTCATTTAGAAGGGGTCAGCGAATTAACCGAGCAGTCGCGGG
TCTATCAACGCCTCAACACGTTATGTCATGACCCAAGAGTTTGCTTTGAGTACAGGCTACAAACTGGCGATTTGCTGTTG
GTGAATAATTTAACCACCTTGCAAGCGAGCCATACGAGTTCGATGCATAACGAATACTGGTCTATTCATCTACAACCAGA
CTCAATCAACTCACCTTGGCAGCCGCACAATCGTATTGTTGAACAAGCTGAACTCACCTCGGCTTAG

Upstream 100 bases:

>100_bases
AAGATGTCATTCTCATTTGTGCACAAATTACTCAACAAGAAAACGACCGTATTGAATATGTTGAATTGCATTCAACCAAT
CCAACGAATGAGGAAAATTT

Downstream 100 bases:

>100_bases
GCTTCAGCCAAAGCAGCAAGTCGGTTAAGAACGCAAAAAGCCGAGGCACTCGCCTCGGCTTTCTATTAGTGTTTTCTTAT
CACTCGCGATTAGCCATTTT

Product: pvcA protein

Products: NA

Alternate protein names: Pyoverdine Biosynthesis Protein PvcA; Pyoverdine Chromophore Biosynthetic Protein PvcA; Pyoverdine Biosynthesis; Siderophore Biosynthesis Protein; PvcA Protein; Pyoverdine/Dityrosine Biosynthesis Protein; Siderophore Biosynthesis-Related Protein; Clavaminate Synthase-Like Protein; Siderophore Biosynthesis Protein PvcA-Like; Pyoverdine Biosynthesis Protein PvcA-Like Protein

Number of amino acids: Translated: 608; Mature: 608

Protein sequence:

>608_residues
MLDAQQETYVEKISFILLNQLIAQCNASYNGLAHLKSQIRRFVNSQEKIKLLLPAFPCKTNNLDKVLSHTPDLGEYVVLR
KFVQCIRDIESVYEPGVTFYIFSDYHTFSDYISVDLDHHYDYSDNLRKMVANMNCSDALKIVNFEHFDEFSDLKDTEYFD
GLREKFGDPDYAENFTELKLKNNKMNQTYLGLKKFMNQDQKFVLAPLSYKDRRRRLADIAKGMMVQGKALDNFLQQKFAD
CIRLSIHEHPMIGKKYSLFLFHERQFKTPWHSTLLFDASRGEFIIDSKENHLKRSGVILPVTHDGKPWCYLQLSAADEVH
AHALRQIRAELQHEKSGLYLECPANRASLDMLLPKELSQLVKEFGSVLLRGFAPLADAEQLQTWYLNHRSAVTWAYEVSV
QAFKGSAGEQPLHWELSCPPAYMAVHPHRYQYEDYTPHEYAVYSVASPDSNTWTVVDAALAVLTINGQEREQLRNTIMHY
SNFSPEHGGNTLHPLVRYCSTSRQDVLRWQDFQHAQGYLTHLEGVSELTEQSRVYQRLNTLCHDPRVCFEYRLQTGDLLL
VNNLTTLQASHTSSMHNEYWSIHLQPDSINSPWQPHNRIVEQAELTSA

Sequences:

>Translated_608_residues
MLDAQQETYVEKISFILLNQLIAQCNASYNGLAHLKSQIRRFVNSQEKIKLLLPAFPCKTNNLDKVLSHTPDLGEYVVLR
KFVQCIRDIESVYEPGVTFYIFSDYHTFSDYISVDLDHHYDYSDNLRKMVANMNCSDALKIVNFEHFDEFSDLKDTEYFD
GLREKFGDPDYAENFTELKLKNNKMNQTYLGLKKFMNQDQKFVLAPLSYKDRRRRLADIAKGMMVQGKALDNFLQQKFAD
CIRLSIHEHPMIGKKYSLFLFHERQFKTPWHSTLLFDASRGEFIIDSKENHLKRSGVILPVTHDGKPWCYLQLSAADEVH
AHALRQIRAELQHEKSGLYLECPANRASLDMLLPKELSQLVKEFGSVLLRGFAPLADAEQLQTWYLNHRSAVTWAYEVSV
QAFKGSAGEQPLHWELSCPPAYMAVHPHRYQYEDYTPHEYAVYSVASPDSNTWTVVDAALAVLTINGQEREQLRNTIMHY
SNFSPEHGGNTLHPLVRYCSTSRQDVLRWQDFQHAQGYLTHLEGVSELTEQSRVYQRLNTLCHDPRVCFEYRLQTGDLLL
VNNLTTLQASHTSSMHNEYWSIHLQPDSINSPWQPHNRIVEQAELTSA
>Mature_608_residues
MLDAQQETYVEKISFILLNQLIAQCNASYNGLAHLKSQIRRFVNSQEKIKLLLPAFPCKTNNLDKVLSHTPDLGEYVVLR
KFVQCIRDIESVYEPGVTFYIFSDYHTFSDYISVDLDHHYDYSDNLRKMVANMNCSDALKIVNFEHFDEFSDLKDTEYFD
GLREKFGDPDYAENFTELKLKNNKMNQTYLGLKKFMNQDQKFVLAPLSYKDRRRRLADIAKGMMVQGKALDNFLQQKFAD
CIRLSIHEHPMIGKKYSLFLFHERQFKTPWHSTLLFDASRGEFIIDSKENHLKRSGVILPVTHDGKPWCYLQLSAADEVH
AHALRQIRAELQHEKSGLYLECPANRASLDMLLPKELSQLVKEFGSVLLRGFAPLADAEQLQTWYLNHRSAVTWAYEVSV
QAFKGSAGEQPLHWELSCPPAYMAVHPHRYQYEDYTPHEYAVYSVASPDSNTWTVVDAALAVLTINGQEREQLRNTIMHY
SNFSPEHGGNTLHPLVRYCSTSRQDVLRWQDFQHAQGYLTHLEGVSELTEQSRVYQRLNTLCHDPRVCFEYRLQTGDLLL
VNNLTTLQASHTSSMHNEYWSIHLQPDSINSPWQPHNRIVEQAELTSA

Specific function: Unknown

COG id: COG3207

COG function: function code Q; Pyoverdine/dityrosine biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320611, Length=313, Percent_Identity=24.2811501597444, Blast_Score=94, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70460; Mature: 70460

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDAQQETYVEKISFILLNQLIAQCNASYNGLAHLKSQIRRFVNSQEKIKLLLPAFPCKT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
NNLDKVLSHTPDLGEYVVLRKFVQCIRDIESVYEPGVTFYIFSDYHTFSDYISVDLDHHY
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCC
DYSDNLRKMVANMNCSDALKIVNFEHFDEFSDLKDTEYFDGLREKFGDPDYAENFTELKL
CHHHHHHHHHHCCCHHHHHEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCEEEEE
KNNKMNQTYLGLKKFMNQDQKFVLAPLSYKDRRRRLADIAKGMMVQGKALDNFLQQKFAD
CCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHH
CIRLSIHEHPMIGKKYSLFLFHERQFKTPWHSTLLFDASRGEFIIDSKENHLKRSGVILP
HHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEEECCHHHHHHCCEEEE
VTHDGKPWCYLQLSAADEVHAHALRQIRAELQHEKSGLYLECPANRASLDMLLPKELSQL
EECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHHHH
VKEFGSVLLRGFAPLADAEQLQTWYLNHRSAVTWAYEVSVQAFKGSAGEQPLHWELSCPP
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCC
AYMAVHPHRYQYEDYTPHEYAVYSVASPDSNTWTVVDAALAVLTINGQEREQLRNTIMHY
CEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEHHEEEEEEEEECCHHHHHHHHHHHHH
SNFSPEHGGNTLHPLVRYCSTSRQDVLRWQDFQHAQGYLTHLEGVSELTEQSRVYQRLNT
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCHDPRVCFEYRLQTGDLLLVNNLTTLQASHTSSMHNEYWSIHLQPDSINSPWQPHNRIV
HHCCCCEEEHEEECCCCEEEEECCEEEECHHHHHHCCCEEEEEEECCCCCCCCCHHHHHH
EQAELTSA
HHHHHCCC
>Mature Secondary Structure
MLDAQQETYVEKISFILLNQLIAQCNASYNGLAHLKSQIRRFVNSQEKIKLLLPAFPCKT
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
NNLDKVLSHTPDLGEYVVLRKFVQCIRDIESVYEPGVTFYIFSDYHTFSDYISVDLDHHY
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEECCCCC
DYSDNLRKMVANMNCSDALKIVNFEHFDEFSDLKDTEYFDGLREKFGDPDYAENFTELKL
CHHHHHHHHHHCCCHHHHHEECCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHCCCEEEEE
KNNKMNQTYLGLKKFMNQDQKFVLAPLSYKDRRRRLADIAKGMMVQGKALDNFLQQKFAD
CCCCCCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHH
CIRLSIHEHPMIGKKYSLFLFHERQFKTPWHSTLLFDASRGEFIIDSKENHLKRSGVILP
HHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCEEEECCHHHHHHCCEEEE
VTHDGKPWCYLQLSAADEVHAHALRQIRAELQHEKSGLYLECPANRASLDMLLPKELSQL
EECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHCCHHHHHHH
VKEFGSVLLRGFAPLADAEQLQTWYLNHRSAVTWAYEVSVQAFKGSAGEQPLHWELSCPP
HHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCC
AYMAVHPHRYQYEDYTPHEYAVYSVASPDSNTWTVVDAALAVLTINGQEREQLRNTIMHY
CEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEEHHEEEEEEEEECCHHHHHHHHHHHHH
SNFSPEHGGNTLHPLVRYCSTSRQDVLRWQDFQHAQGYLTHLEGVSELTEQSRVYQRLNT
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCHDPRVCFEYRLQTGDLLLVNNLTTLQASHTSSMHNEYWSIHLQPDSINSPWQPHNRIV
HHCCCCEEEHEEECCCCEEEEECCEEEECHHHHHHCCCEEEEEEECCCCCCCCCHHHHHH
EQAELTSA
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA