| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227082078
Identifier: 227082078
GI number: 227082078
Start: 2035290
End: 2035481
Strand: Direct
Name: 227082078
Synonym: VCM66_1872
Alternate gene names: NA
Gene position: 2035290-2035481 (Clockwise)
Preceding gene: 227082075
Following gene: 227082079
Centisome position: 70.36
GC content: 36.46
Gene sequence:
>192_bases ATGTACGGGGAGATGAGTAGATACGTTATCCAATTACTGATGAATGGTTCAATAATGAGCCAAGATGTCATTCTCATTTG TGCACAAATTACTCAACAAGAAAACGACCGTATTGAATATGTTGAATTGCATTCAACCAATCCAACGAATGAGGAAAATT TATGCTCGATGCTCAACAAGAAACCTATGTAG
Upstream 100 bases:
>100_bases TTTTTATTGGTTTCAAGCAGATTTCATATAACCAAACGATTTTTTGAATTTGTGGCATTAATTCCAATTCCTATGTGCGG AATTAATTCACCTAGAGTAG
Downstream 100 bases:
>100_bases AGAAGATCTCATTTATTCTTCTAAATCAACTAATTGCACAATGCAATGCCAGTTACAACGGGCTTGCTCACTTAAAAAGT CAAATTCGTAGATTTGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MYGEMSRYVIQLLMNGSIMSQDVILICAQITQQENDRIEYVELHSTNPTNEENLCSMLNKKPM
Sequences:
>Translated_63_residues MYGEMSRYVIQLLMNGSIMSQDVILICAQITQQENDRIEYVELHSTNPTNEENLCSMLNKKPM >Mature_63_residues MYGEMSRYVIQLLMNGSIMSQDVILICAQITQQENDRIEYVELHSTNPTNEENLCSMLNKKPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7311; Mature: 7311
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 9.5 %Met (Translated Protein) 12.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 9.5 %Met (Mature Protein) 12.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYGEMSRYVIQLLMNGSIMSQDVILICAQITQQENDRIEYVELHSTNPTNEENLCSMLNK CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCC KPM CCC >Mature Secondary Structure MYGEMSRYVIQLLMNGSIMSQDVILICAQITQQENDRIEYVELHSTNPTNEENLCSMLNK CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHCC KPM CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA