Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

Click here to switch to the map view.

The map label for this gene is 227082071

Identifier: 227082071

GI number: 227082071

Start: 2028692

End: 2029987

Strand: Reverse

Name: 227082071

Synonym: VCM66_1865

Alternate gene names: NA

Gene position: 2029987-2028692 (Counterclockwise)

Preceding gene: 227082076

Following gene: 227082070

Centisome position: 70.18

GC content: 46.99

Gene sequence:

>1296_bases
ATGAAACGCATCCCCGCATTGGACAGTATCCGAGGATTATTGTTGGTGCTGATCACCTTCAACCATCTTATCTGGTACAG
CGGCGGTACAACCATACTGCAAATGATTACTCATGAACCTGTCGGCGTGTTTGGTGCCGCGGAAGGTTTCATCTTTATGT
CTGGACTACTGGCTGGTATGGTCTATAGCCGCCGTGAATACACTGACCGTCAAGCGGCTGGGAAAGTGTGGCATCGTGCG
TTCATTATCTACAAATACCACATTGCAGGACTCTTTATTGCTATGCTGTGGTTTTGGCTGGGCAGCCACTATTTTGCTGA
ACAAGTCACCGTGTTTGGTGGCAGCTTTAGTAATCTGCCTACTATGCCTTTTATGACCATGTTGATGAGCTTCCTGCTGC
TCAATAAACCCGCCTATCTGGAAATTTTGCCACTCTATATCATGTATATGTTGCTGTTTCCTTTGGCACTGTACGGGTTT
CGTCGCGGTTATCTTAAATGGGTACTTGCGCTGAGCGTGCTGATTTGGGCAAGCAGTGGTTGGATTCAAGGCGCTATGCT
TTTGCCACTCTTTAAGTGGCTTTCTGCAGAATACATTCCTGAACTCGGTTACTTTGACCCTTTTGCTTGGCAACTGCTGT
TTTTCTTTGGTGGTGCATTAGGTTATTGCAAGCGTCAAGGCGAGTTGGCGTGGTTCCACCCTAAATTGGTTTGGTTATGT
GCGGCGATAGCTTTGGTTATCTTTATGGCTTACCGCGATCTTTTAACGCCATTGGGTATTACTAAGCAGATGGTGTATGC
GGCATCCAGTAAGCCAGAGCTTGGCTGGTTGCGTGTACTGAGTTTGAGTGTATGGATCTACTTAATCTCTGTTGTGATCC
GCTTTTTCCCAACGGCATTAGTGTATGAACCGCTGAGCTATCTCGGCCGCCATTCATTACAAGTTTTTACTTGGCAAACC
GTACTGATTTTTATCACTGCACCTTGGCTTCTGACCACGCGCGACTCGGTTTGGCATACAGCGATTATTCTGCTGCTCTG
TACAACATTGTGGATTCCCGCTTGGCTACAGACACAGCGTAAAGAAAAGCCAATCAATTTGTCATCTGCGGTGGTGGCTT
GCCTTTCACTGGTTTTAGTGATGACGACGAATTTTACAAGCTTCCCTCAACCACCCAAAAGTGACATTGTGGCGAGCAGT
GATGAGGTCGTCACCGATGCTTTACCCAGCAGTGAGATTTCTAATCATGAGCTGCTGAGTGAACCGATGAACAGTGATGA
GACACCCGTGAACTGA

Upstream 100 bases:

>100_bases
CCGTATTACCCAATATATTCAACCGCTTATCCGCATTTTTAGTCGACTTGGTATTTTTGTGACTACCAATTTATTGGACT
GAAAACGCAGGGAGATACCC

Downstream 100 bases:

>100_bases
GCCAGAATAAACTGTCCCGTGTATGTTATGCCGATGCCGTTTTTAGCTGCATCGGCTAACGCAGTTGTCGGTATACCTGC
GTACTTTTTCTGACTACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Acyltransferase Family Protein; Transmembrane Protein

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MKRIPALDSIRGLLLVLITFNHLIWYSGGTTILQMITHEPVGVFGAAEGFIFMSGLLAGMVYSRREYTDRQAAGKVWHRA
FIIYKYHIAGLFIAMLWFWLGSHYFAEQVTVFGGSFSNLPTMPFMTMLMSFLLLNKPAYLEILPLYIMYMLLFPLALYGF
RRGYLKWVLALSVLIWASSGWIQGAMLLPLFKWLSAEYIPELGYFDPFAWQLLFFFGGALGYCKRQGELAWFHPKLVWLC
AAIALVIFMAYRDLLTPLGITKQMVYAASSKPELGWLRVLSLSVWIYLISVVIRFFPTALVYEPLSYLGRHSLQVFTWQT
VLIFITAPWLLTTRDSVWHTAIILLLCTTLWIPAWLQTQRKEKPINLSSAVVACLSLVLVMTTNFTSFPQPPKSDIVASS
DEVVTDALPSSEISNHELLSEPMNSDETPVN

Sequences:

>Translated_431_residues
MKRIPALDSIRGLLLVLITFNHLIWYSGGTTILQMITHEPVGVFGAAEGFIFMSGLLAGMVYSRREYTDRQAAGKVWHRA
FIIYKYHIAGLFIAMLWFWLGSHYFAEQVTVFGGSFSNLPTMPFMTMLMSFLLLNKPAYLEILPLYIMYMLLFPLALYGF
RRGYLKWVLALSVLIWASSGWIQGAMLLPLFKWLSAEYIPELGYFDPFAWQLLFFFGGALGYCKRQGELAWFHPKLVWLC
AAIALVIFMAYRDLLTPLGITKQMVYAASSKPELGWLRVLSLSVWIYLISVVIRFFPTALVYEPLSYLGRHSLQVFTWQT
VLIFITAPWLLTTRDSVWHTAIILLLCTTLWIPAWLQTQRKEKPINLSSAVVACLSLVLVMTTNFTSFPQPPKSDIVASS
DEVVTDALPSSEISNHELLSEPMNSDETPVN
>Mature_431_residues
MKRIPALDSIRGLLLVLITFNHLIWYSGGTTILQMITHEPVGVFGAAEGFIFMSGLLAGMVYSRREYTDRQAAGKVWHRA
FIIYKYHIAGLFIAMLWFWLGSHYFAEQVTVFGGSFSNLPTMPFMTMLMSFLLLNKPAYLEILPLYIMYMLLFPLALYGF
RRGYLKWVLALSVLIWASSGWIQGAMLLPLFKWLSAEYIPELGYFDPFAWQLLFFFGGALGYCKRQGELAWFHPKLVWLC
AAIALVIFMAYRDLLTPLGITKQMVYAASSKPELGWLRVLSLSVWIYLISVVIRFFPTALVYEPLSYLGRHSLQVFTWQT
VLIFITAPWLLTTRDSVWHTAIILLLCTTLWIPAWLQTQRKEKPINLSSAVVACLSLVLVMTTNFTSFPQPPKSDIVASS
DEVVTDALPSSEISNHELLSEPMNSDETPVN

Specific function: Unknown

COG id: COG4645

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49068; Mature: 49068

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCCCC
>Mature Secondary Structure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CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA