| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227082076
Identifier: 227082076
GI number: 227082076
Start: 2034060
End: 2034167
Strand: Reverse
Name: 227082076
Synonym: VCM66_1870
Alternate gene names: NA
Gene position: 2034167-2034060 (Counterclockwise)
Preceding gene: 227082077
Following gene: 227082071
Centisome position: 70.33
GC content: 50.93
Gene sequence:
>108_bases ATGAGCCGCATGGGTGTGTCGATGGCTTCTAGTGCCGGGGAAAGTCACCAAGCCCGTTTAGGGCTTGATGAAGATCGAGT GAACGCAGGTATTGAACTAGTGAGATAA
Upstream 100 bases:
>100_bases CGTAAAAATTTGCCGCCAAGGGTGCGTTTATTTATCGATTATCTGGTGGGAACATTGTGTGGTTAATGGAGAGTGTTTAA ACAGGTAGAGCCAACGCGCA
Downstream 100 bases:
>100_bases GTTGAATTCTGTCAACACACCTTCTGCCAACACACTGTGAACCTGATGCAGTGGAGTGACCCATTCGATGTAAGCATCAG GGCGAACCAATACCGCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 35; Mature: 34
Protein sequence:
>35_residues MSRMGVSMASSAGESHQARLGLDEDRVNAGIELVR
Sequences:
>Translated_35_residues MSRMGVSMASSAGESHQARLGLDEDRVNAGIELVR >Mature_34_residues SRMGVSMASSAGESHQARLGLDEDRVNAGIELVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3731; Mature: 3600
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRMGVSMASSAGESHQARLGLDEDRVNAGIELVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure SRMGVSMASSAGESHQARLGLDEDRVNAGIELVR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA