| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227082067
Identifier: 227082067
GI number: 227082067
Start: 2025546
End: 2026217
Strand: Direct
Name: 227082067
Synonym: VCM66_1861
Alternate gene names: NA
Gene position: 2025546-2026217 (Clockwise)
Preceding gene: 227082066
Following gene: 227082068
Centisome position: 70.03
GC content: 46.43
Gene sequence:
>672_bases ATGGCGCGTATTCTGAAAGTGCTGTTTTTCCTATTGATCGTTAAACCCTTAGTTTTTATTGGGTTAGGACTCAATATTTT GCAGCGCCAAAATCTCCCTACTCAAGGTCCAATGGTGATTGCCGCCAATCACAATAGTCATTTAGATACACTCGTACTCA TGGCTCTGTTTCCGCTGCATTTAATTCACCGAGTGCGCCCTGTCGCTGCAGCAGATTACTTTCTGGTGAATCCCTTTGTG GCTTGGTTATCTCTGAATATTATTGGCATCATTCCGATCCGTCGCTCCCCCTCCAGCAGTGAACGTGACGCGGTACTGCA AGCTTGCCATGAAGCTTTAGATCAAGGCGATATTCTGATTATTTTCCCAGAAGGGAGTCGTGGTGAGCCGGAAATAATGA GTGGTTTGAAAAAAGGCATTTATCATTTAGTCAAAAATCACCCGGAGCGTGCGGTATTACCTGTGGTCATGCGTGGTTTA GGGCGCGCACTACCCAAAGGTACGGCGATGTTCGTACCTTTCAATTGCGATGTGGTGATCGGTGAACCGTTAACCGGTTT TAGTGATGCAGAACATTTCGTTCAGGTCATGCAAAAAAATTACCAGCAGTTGGCGACTCACTGTATCACTCAAACCCAAG CGACTCTGGATAGCGAAACCCTCGACAGCTGA
Upstream 100 bases:
>100_bases ATTCCGGGCCACGGGGGCATTCTGGACAGGGTCGATAGCTTGATGTTTACTGCTCCGCTGTTTTTCCACTACCTCTATTA TCTCTATTACTGAGGATCAT
Downstream 100 bases:
>100_bases GGAATTTAACGTTTTGCTAACAAGCTCAAGCTTACAATTGCCATTTACCGTTAGAATATTTGTTCTAATCACAACACGAG TAAAAAGGCATGGAATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Acyltransferase; 1-Acyl-Sn-Glycerol-3-Phosphate Acyltransferase; Acyltransferase Protein; 2-Acylglycerophosphoethanolamine Acyltransferase; Acyltransferase Domain Protein
Number of amino acids: Translated: 223; Mature: 222
Protein sequence:
>223_residues MARILKVLFFLLIVKPLVFIGLGLNILQRQNLPTQGPMVIAANHNSHLDTLVLMALFPLHLIHRVRPVAAADYFLVNPFV AWLSLNIIGIIPIRRSPSSSERDAVLQACHEALDQGDILIIFPEGSRGEPEIMSGLKKGIYHLVKNHPERAVLPVVMRGL GRALPKGTAMFVPFNCDVVIGEPLTGFSDAEHFVQVMQKNYQQLATHCITQTQATLDSETLDS
Sequences:
>Translated_223_residues MARILKVLFFLLIVKPLVFIGLGLNILQRQNLPTQGPMVIAANHNSHLDTLVLMALFPLHLIHRVRPVAAADYFLVNPFV AWLSLNIIGIIPIRRSPSSSERDAVLQACHEALDQGDILIIFPEGSRGEPEIMSGLKKGIYHLVKNHPERAVLPVVMRGL GRALPKGTAMFVPFNCDVVIGEPLTGFSDAEHFVQVMQKNYQQLATHCITQTQATLDSETLDS >Mature_222_residues ARILKVLFFLLIVKPLVFIGLGLNILQRQNLPTQGPMVIAANHNSHLDTLVLMALFPLHLIHRVRPVAAADYFLVNPFVA WLSLNIIGIIPIRRSPSSSERDAVLQACHEALDQGDILIIFPEGSRGEPEIMSGLKKGIYHLVKNHPERAVLPVVMRGLG RALPKGTAMFVPFNCDVVIGEPLTGFSDAEHFVQVMQKNYQQLATHCITQTQATLDSETLDS
Specific function: Unknown
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24671; Mature: 24540
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARILKVLFFLLIVKPLVFIGLGLNILQRQNLPTQGPMVIAANHNSHLDTLVLMALFPLH CHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH LIHRVRPVAAADYFLVNPFVAWLSLNIIGIIPIRRSPSSSERDAVLQACHEALDQGDILI HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE IFPEGSRGEPEIMSGLKKGIYHLVKNHPERAVLPVVMRGLGRALPKGTAMFVPFNCDVVI EECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEE GEPLTGFSDAEHFVQVMQKNYQQLATHCITQTQATLDSETLDS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC >Mature Secondary Structure ARILKVLFFLLIVKPLVFIGLGLNILQRQNLPTQGPMVIAANHNSHLDTLVLMALFPLH HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHH LIHRVRPVAAADYFLVNPFVAWLSLNIIGIIPIRRSPSSSERDAVLQACHEALDQGDILI HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEE IFPEGSRGEPEIMSGLKKGIYHLVKNHPERAVLPVVMRGLGRALPKGTAMFVPFNCDVVI EECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCEEE GEPLTGFSDAEHFVQVMQKNYQQLATHCITQTQATLDSETLDS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA