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The map label for this gene is 227082068

Identifier: 227082068

GI number: 227082068

Start: 2026307

End: 2026756

Strand: Direct

Name: 227082068

Synonym: VCM66_1862

Alternate gene names: NA

Gene position: 2026307-2026756 (Clockwise)

Preceding gene: 227082067

Following gene: 227082069

Centisome position: 70.05

GC content: 46.0

Gene sequence:

>450_bases
ATGGAATCGCTTTTAAAAGATTTCCCTGTGATCACGAAAATCGTGGTCGCATGGGGAGAGATGGATGCGCTGCAACACGT
CAATAATGTGGTCTACTTTCGCTACTTTGAAACCGCGCGAATTGATTACTTCGCTCATCTTAAGCTGATGGAAGAGTTAC
AACGCACTCAAATTGGCCCTGTGTTATCGGAGACACAAGCGCGTTATAAAATTCCGGTCACTTTTCCCGATACGCTGCTG
ATTGGTTCACGCATTACCTCTGTTCAAGCAGATCGCTTTAGCATGGAATACCAAGTGGTGAGCCAAAAACTTGGTAAAGT
GACTACCGTCGGTAGCGCTACGGTTGTGATGTTTAACTTTAAAACGGGTGAGAAAGCCTTGCTACCGCCTACGGTGCCCG
AAGCCATTCACACTCTACAAGGTGAATCCGTCTCTATAAACAATGCATAG

Upstream 100 bases:

>100_bases
TCGACAGCTGAGGAATTTAACGTTTTGCTAACAAGCTCAAGCTTACAATTGCCATTTACCGTTAGAATATTTGTTCTAAT
CACAACACGAGTAAAAAGGC

Downstream 100 bases:

>100_bases
ACAAACCCTGTGATTGAGGTGAAAGCACGTTCCCACTTCAGGTGATAAGGGCACGGTCACCAAGCGATCAAACCCGCTTG
GTGACTATCTGCAAAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Thioesterase; Thioesterase Superfamily; Thioesterase Protein; Thioesterase Family Protein; Acyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MESLLKDFPVITKIVVAWGEMDALQHVNNVVYFRYFETARIDYFAHLKLMEELQRTQIGPVLSETQARYKIPVTFPDTLL
IGSRITSVQADRFSMEYQVVSQKLGKVTTVGSATVVMFNFKTGEKALLPPTVPEAIHTLQGESVSINNA

Sequences:

>Translated_149_residues
MESLLKDFPVITKIVVAWGEMDALQHVNNVVYFRYFETARIDYFAHLKLMEELQRTQIGPVLSETQARYKIPVTFPDTLL
IGSRITSVQADRFSMEYQVVSQKLGKVTTVGSATVVMFNFKTGEKALLPPTVPEAIHTLQGESVSINNA
>Mature_149_residues
MESLLKDFPVITKIVVAWGEMDALQHVNNVVYFRYFETARIDYFAHLKLMEELQRTQIGPVLSETQARYKIPVTFPDTLL
IGSRITSVQADRFSMEYQVVSQKLGKVTTVGSATVVMFNFKTGEKALLPPTVPEAIHTLQGESVSINNA

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16753; Mature: 16753

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLLKDFPVITKIVVAWGEMDALQHVNNVVYFRYFETARIDYFAHLKLMEELQRTQIGP
CCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCC
VLSETQARYKIPVTFPDTLLIGSRITSVQADRFSMEYQVVSQKLGKVTTVGSATVVMFNF
HHHCCCCEEEEEECCCCHHEECCHHCEEEHHHHHHHHHHHHHHHCCEEECCCEEEEEEEE
KTGEKALLPPTVPEAIHTLQGESVSINNA
CCCCCCCCCCCCHHHHHHHCCCEEECCCC
>Mature Secondary Structure
MESLLKDFPVITKIVVAWGEMDALQHVNNVVYFRYFETARIDYFAHLKLMEELQRTQIGP
CCHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCC
VLSETQARYKIPVTFPDTLLIGSRITSVQADRFSMEYQVVSQKLGKVTTVGSATVVMFNF
HHHCCCCEEEEEECCCCHHEECCHHCEEEHHHHHHHHHHHHHHHCCEEECCCEEEEEEEE
KTGEKALLPPTVPEAIHTLQGESVSINNA
CCCCCCCCCCCCHHHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA