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The map label for this gene is priC [C]

Identifier: 227081986

GI number: 227081986

Start: 1933540

End: 1934103

Strand: Direct

Name: priC [C]

Synonym: VCM66_1780

Alternate gene names: 227081986

Gene position: 1933540-1934103 (Clockwise)

Preceding gene: 227081985

Following gene: 227081987

Centisome position: 66.85

GC content: 46.81

Gene sequence:

>564_bases
ATGGTGGGTGGGATGATGGAGAGCTACAGCAAATTTCATACGATTCTCAACGAGCTCAAGCATTCTGCCGCCCAGCTCGA
CCGTCAACGTGGTGAACATCATCGCCCATTATTTGATGAGGTGTTATTCCATTGCCACGGAAAGCTATTAACACCTTGTG
TTGAAGAAGCTCATTCAACACTGCAAGCCTTAATCCGTGAAAAAGAGAGTGGACGTTTGACGGCATTGCGCGCGGAATAT
TTATCTGAACGGCTACTTGCACAAATCGCTGCACTGACTCGTGAGCTTTCAACTCAAAATGTGCGTCGTAACGAACCGAA
ACCGCACGCTTATTTTAAAAAACCCATTAATGAGCTTTATCAGGAGCTGGCTCAACATCAAGATTGGGAACGGCGTTTGA
TGGATTTGGTGCGTGATAAAGCCCTGTTGCTTGAGCAAGCCTCGGCAACAGAAAAAGCGGCGGCTCAGCAAGCTCTGTTG
CAATCCGAGCAGCGACTCAACCGCTGCCGTGAAGCAAAAATAAAAATTGAGAAACGAATTACCACTCAAGAGAGAAAAGC
GTAA

Upstream 100 bases:

>100_bases
ACGTCGGAGCTCACTCAGCCATTCGCTTTGGAGCTCCGTTTATCCGTCCCCTATTTATTTTAGTGGTCACGATTTTGGCG
GGGAAATTGGCTTATGACGC

Downstream 100 bases:

>100_bases
ATGTCGACTCCATCGATTCCACTGAATGAAGCCTCTGATGAGATCAAACTCGCGGTCGATCTTATCTTTTTATTAGAGTC
TCATGCGATTGAACCCCAGA

Product: primosomal replication protein N''

Products: NA

Alternate protein names: Primosomal Replication Protein N; Primosomal Replication Protein N``; Primosomal Replication Protein N\\'

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MVGGMMESYSKFHTILNELKHSAAQLDRQRGEHHRPLFDEVLFHCHGKLLTPCVEEAHSTLQALIREKESGRLTALRAEY
LSERLLAQIAALTRELSTQNVRRNEPKPHAYFKKPINELYQELAQHQDWERRLMDLVRDKALLLEQASATEKAAAQQALL
QSEQRLNRCREAKIKIEKRITTQERKA

Sequences:

>Translated_187_residues
MVGGMMESYSKFHTILNELKHSAAQLDRQRGEHHRPLFDEVLFHCHGKLLTPCVEEAHSTLQALIREKESGRLTALRAEY
LSERLLAQIAALTRELSTQNVRRNEPKPHAYFKKPINELYQELAQHQDWERRLMDLVRDKALLLEQASATEKAAAQQALL
QSEQRLNRCREAKIKIEKRITTQERKA
>Mature_187_residues
MVGGMMESYSKFHTILNELKHSAAQLDRQRGEHHRPLFDEVLFHCHGKLLTPCVEEAHSTLQALIREKESGRLTALRAEY
LSERLLAQIAALTRELSTQNVRRNEPKPHAYFKKPINELYQELAQHQDWERRLMDLVRDKALLLEQASATEKAAAQQALL
QSEQRLNRCREAKIKIEKRITTQERKA

Specific function: Pria Recognizes A Specific Hairpin Sequence On Bacteriophage Phi X174 Ssdna. This Structure Is Then Recognized And Bound By Proteins Prib And Pric. Formation Of The Primosome Proceeds With The Subsequent Actions Of Dnab, Dnac, Dnat And Primase. [C]

COG id: COG3923

COG function: function code L; Primosomal replication protein N''

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21759; Mature: 21759

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGGMMESYSKFHTILNELKHSAAQLDRQRGEHHRPLFDEVLFHCHGKLLTPCVEEAHST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
LQALIREKESGRLTALRAEYLSERLLAQIAALTRELSTQNVRRNEPKPHAYFKKPINELY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QELAQHQDWERRLMDLVRDKALLLEQASATEKAAAQQALLQSEQRLNRCREAKIKIEKRI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTQERKA
HHHHCCC
>Mature Secondary Structure
MVGGMMESYSKFHTILNELKHSAAQLDRQRGEHHRPLFDEVLFHCHGKLLTPCVEEAHST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
LQALIREKESGRLTALRAEYLSERLLAQIAALTRELSTQNVRRNEPKPHAYFKKPINELY
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QELAQHQDWERRLMDLVRDKALLLEQASATEKAAAQQALLQSEQRLNRCREAKIKIEKRI
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTQERKA
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA