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The map label for this gene is yfcA [C]

Identifier: 227081985

GI number: 227081985

Start: 1932776

End: 1933555

Strand: Direct

Name: yfcA [C]

Synonym: VCM66_1779

Alternate gene names: 227081985

Gene position: 1932776-1933555 (Clockwise)

Preceding gene: 227081984

Following gene: 227081986

Centisome position: 66.82

GC content: 50.0

Gene sequence:

>780_bases
TTGATGGAATGGATAGAACCCACCACGATAATGGTGCTGGCTCTTGTTGCTTTTATTGCCGGATTTATCGATGCGGTCGC
AGGCGGCGGCGGAATGTTGACCGTACCAGCGCTACTTTCGCTAGGTTTACCGCCTCATTTGGCTTTGGGAACCAATAAAT
TAGCTGCGACGTTTGCTTCATCAACCGCGGCATGGACTTACTATCGTCAAAAACTCTTTGATCCTGCATGTTGGAAACGC
GCTTTTATTGCAACCTTGATTGGCGCCATACTGGGCACTTTGGCCGTTGATGCGATCAGCACGGATTGGCTACGTAAAGT
ACTCCCGCTGATTATTCTGGCTGCGGCTTTATATACGGTTTTACATCGCCCCCATCAAACGGAACAAAGTGTCACGCCTG
AACCATGCCCTAAATTGCATCGCAAGCAGATCCTGCAAGGCATAGGGCTAGGATTTTATGATGGCTTAGCGGGTCCTGGC
ACTGGCGCGTTCTGGACGGTCAGCTCAATGGCGTTGTATCGCTTCAATATCCTGCTGGCTTCGGGACTTGCCAAAGCTAT
GAATTTAACCAGTAATTTCACCTCACTGGTGACTTTTGCCCTACTCGGTCATATTGATTGGCTGTTGGGTTTGACGATGG
GAGTCTGTTTGATGGCGGGAGCGTACGTCGGAGCTCACTCAGCCATTCGCTTTGGAGCTCCGTTTATCCGTCCCCTATTT
ATTTTAGTGGTCACGATTTTGGCGGGGAAATTGGCTTATGACGCATGGTGGGTGGGATGA

Upstream 100 bases:

>100_bases
AAGCGTTACGGAAAAGCGTTGTTGGATGCCTTACCGCCCTTTAAGCGCACGATTGAATACTGATAATAACGATTAACTCA
CCACAATTAGGATTGCGCTT

Downstream 100 bases:

>100_bases
TGGAGAGCTACAGCAAATTTCATACGATTCTCAACGAGCTCAAGCATTCTGCCGCCCAGCTCGACCGTCAACGTGGTGAA
CATCATCGCCCATTATTTGA

Product: putative Inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MMEWIEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAWTYYRQKLFDPACWKR
AFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPG
TGAFWTVSSMALYRFNILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLF
ILVVTILAGKLAYDAWWVG

Sequences:

>Translated_259_residues
MMEWIEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAWTYYRQKLFDPACWKR
AFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPG
TGAFWTVSSMALYRFNILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLF
ILVVTILAGKLAYDAWWVG
>Mature_259_residues
MMEWIEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFASSTAAWTYYRQKLFDPACWKR
AFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTVLHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPG
TGAFWTVSSMALYRFNILLASGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLF
ILVVTILAGKLAYDAWWVG

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0721 family [H]

Homologues:

Organism=Escherichia coli, GI1788667, Length=257, Percent_Identity=35.0194552529183, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002781 [H]

Pfam domain/function: PF01925 DUF81 [H]

EC number: NA

Molecular weight: Translated: 27717; Mature: 27717

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEWIEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFAS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHH
STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
SGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILVVTILAGKLAYDAWWVG
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMEWIEPTTIMVLALVAFIAGFIDAVAGGGGMLTVPALLSLGLPPHLALGTNKLAATFAS
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHH
STAAWTYYRQKLFDPACWKRAFIATLIGAILGTLAVDAISTDWLRKVLPLIILAAALYTV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHRPHQTEQSVTPEPCPKLHRKQILQGIGLGFYDGLAGPGTGAFWTVSSMALYRFNILLA
HHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
SGLAKAMNLTSNFTSLVTFALLGHIDWLLGLTMGVCLMAGAYVGAHSAIRFGAPFIRPLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ILVVTILAGKLAYDAWWVG
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]