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The map label for this gene is yuxH [H]

Identifier: 227081980

GI number: 227081980

Start: 1926562

End: 1927776

Strand: Direct

Name: yuxH [H]

Synonym: VCM66_1774

Alternate gene names: 227081980

Gene position: 1926562-1927776 (Clockwise)

Preceding gene: 227081979

Following gene: 227081981

Centisome position: 66.6

GC content: 43.62

Gene sequence:

>1215_bases
TTGAAGTACTCGTATGTCGCTAGACAACCCATATTGGATCGTGAAAAAAGCACCATCGGTTACGAACTTCTCTTTCGTGA
TGGGCCTAAAAACACGTTTCCAGACATCGATCCCGAGGAAGCCACTAGCCGCCTCCTTTCCGATCATTTCTTGACCGCAC
ACTACAGCACTCTGGGTGATCTTCTTGGATTCGTAAACTTCCCTTATCAAAGTTTACTCAATATGGTGCCCACGCTGTTT
CCGGTTAAAAGTCTGGTTGTCGAAATTCTTGAAGATTGCCCACCAACCCCTGAACTGCTCAGTGCTATCAAAAAAATGGC
TCAGCTCGGATACAAAATTGCACTGGATGATTTTATCCCAAGCAATGATTGGAAAGCATTTCTACCTTATATCTCGATTA
TCAAATTTGATATTCGTCTCGTGCCTATCCCGAAAGCCAAGCTCTTTATCAATAAACTGCGCTCCATGAAAATTGAGTTT
CTGGCCGAAAAAGTTGAAACCTACGAAGAGTTTGAACAGGCCAAGCAAGCGGGTTTCCACTATTTTCAAGGTTACTTTTT
TAGTAAGCCTGAAATTATTCAGCGCAAAGCCCTGCAACCCTCTTTTCTGACCATTGTGCAACTACTTAAAGAAGTCGCGA
AACCCGAAGTTGATTTTCGTGAAATTGAAACGATTGTCGCCAAAGACATTTCTCTTTCATATAAGCTACTCACGTTCGTA
AACTCTTCAGCAACAGTGAGTTCAAAAATCCAATCTTTCCGTCAAGCGCTGGTCTATCTAGGGCAACAGAAACTCCGTAA
ATTCATTTCGCTCGTTGCGATTGCTTCAACACAAGATTCCAAACCAGACTATCTTTATAATCTTGCCATTCTACGCGCCC
GCTTTTGCGAAATGCTCAGTGAACGAGTGCCGACAAACATTGCCCCCGGAACCGGATTTCTAACCGGTATGTTTTCTGTG
CTAGACAGCCTACTTGATCAATCCCTTGATTCCATTGTGAAAGAAATGCCCATCGAGGAAGAAGTCAAACAGGCCTTAAC
TCAAGGCAGTGGCACTTTAGGGCAAATATTGGCATTGAATAAAGCTTATGAAATGGCGGATTGGGGGCAAGTTGTGACTC
TTGGGCAAGCACTTAACCTTCCAAACGAGGCACCAACAGAATGCTATATCGAAGCCGTCAAATGGACAGCCGATCTTCTT
GGTGTACAAACCTAA

Upstream 100 bases:

>100_bases
AGTAATCAATTAGTAATAACCATGTTCTTGACCAATACTTATCTCGGTAAACCCTTAAAATACTGACAAAAGAAACAACA
ACCCGAAAATAGGTAAATCT

Downstream 100 bases:

>100_bases
ACTGGTAATTACGCTTACGGGCCGATAAACTCCATCTACCTACTCAACGTTTATCTTTTCTATGTCCTGTTATTGCGGAA
ATACTCAACCTTACTCGCAG

Product: HD-GYP/EAL family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKYSYVARQPILDREKSTIGYELLFRDGPKNTFPDIDPEEATSRLLSDHFLTAHYSTLGDLLGFVNFPYQSLLNMVPTLF
PVKSLVVEILEDCPPTPELLSAIKKMAQLGYKIALDDFIPSNDWKAFLPYISIIKFDIRLVPIPKAKLFINKLRSMKIEF
LAEKVETYEEFEQAKQAGFHYFQGYFFSKPEIIQRKALQPSFLTIVQLLKEVAKPEVDFREIETIVAKDISLSYKLLTFV
NSSATVSSKIQSFRQALVYLGQQKLRKFISLVAIASTQDSKPDYLYNLAILRARFCEMLSERVPTNIAPGTGFLTGMFSV
LDSLLDQSLDSIVKEMPIEEEVKQALTQGSGTLGQILALNKAYEMADWGQVVTLGQALNLPNEAPTECYIEAVKWTADLL
GVQT

Sequences:

>Translated_404_residues
MKYSYVARQPILDREKSTIGYELLFRDGPKNTFPDIDPEEATSRLLSDHFLTAHYSTLGDLLGFVNFPYQSLLNMVPTLF
PVKSLVVEILEDCPPTPELLSAIKKMAQLGYKIALDDFIPSNDWKAFLPYISIIKFDIRLVPIPKAKLFINKLRSMKIEF
LAEKVETYEEFEQAKQAGFHYFQGYFFSKPEIIQRKALQPSFLTIVQLLKEVAKPEVDFREIETIVAKDISLSYKLLTFV
NSSATVSSKIQSFRQALVYLGQQKLRKFISLVAIASTQDSKPDYLYNLAILRARFCEMLSERVPTNIAPGTGFLTGMFSV
LDSLLDQSLDSIVKEMPIEEEVKQALTQGSGTLGQILALNKAYEMADWGQVVTLGQALNLPNEAPTECYIEAVKWTADLL
GVQT
>Mature_404_residues
MKYSYVARQPILDREKSTIGYELLFRDGPKNTFPDIDPEEATSRLLSDHFLTAHYSTLGDLLGFVNFPYQSLLNMVPTLF
PVKSLVVEILEDCPPTPELLSAIKKMAQLGYKIALDDFIPSNDWKAFLPYISIIKFDIRLVPIPKAKLFINKLRSMKIEF
LAEKVETYEEFEQAKQAGFHYFQGYFFSKPEIIQRKALQPSFLTIVQLLKEVAKPEVDFREIETIVAKDISLSYKLLTFV
NSSATVSSKIQSFRQALVYLGQQKLRKFISLVAIASTQDSKPDYLYNLAILRARFCEMLSERVPTNIAPGTGFLTGMFSV
LDSLLDQSLDSIVKEMPIEEEVKQALTQGSGTLGQILALNKAYEMADWGQVVTLGQALNLPNEAPTECYIEAVKWTADLL
GVQT

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 45660; Mature: 45660

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYSYVARQPILDREKSTIGYELLFRDGPKNTFPDIDPEEATSRLLSDHFLTAHYSTLGD
CCCCHHHHCCCCCCCCHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLGFVNFPYQSLLNMVPTLFPVKSLVVEILEDCPPTPELLSAIKKMAQLGYKIALDDFIP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCC
SNDWKAFLPYISIIKFDIRLVPIPKAKLFINKLRSMKIEFLAEKVETYEEFEQAKQAGFH
CCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
YFQGYFFSKPEIIQRKALQPSFLTIVQLLKEVAKPEVDFREIETIVAKDISLSYKLLTFV
HHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
NSSATVSSKIQSFRQALVYLGQQKLRKFISLVAIASTQDSKPDYLYNLAILRARFCEMLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ERVPTNIAPGTGFLTGMFSVLDSLLDQSLDSIVKEMPIEEEVKQALTQGSGTLGQILALN
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
KAYEMADWGQVVTLGQALNLPNEAPTECYIEAVKWTADLLGVQT
HHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKYSYVARQPILDREKSTIGYELLFRDGPKNTFPDIDPEEATSRLLSDHFLTAHYSTLGD
CCCCHHHHCCCCCCCCHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLGFVNFPYQSLLNMVPTLFPVKSLVVEILEDCPPTPELLSAIKKMAQLGYKIALDDFIP
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCC
SNDWKAFLPYISIIKFDIRLVPIPKAKLFINKLRSMKIEFLAEKVETYEEFEQAKQAGFH
CCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
YFQGYFFSKPEIIQRKALQPSFLTIVQLLKEVAKPEVDFREIETIVAKDISLSYKLLTFV
HHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
NSSATVSSKIQSFRQALVYLGQQKLRKFISLVAIASTQDSKPDYLYNLAILRARFCEMLS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
ERVPTNIAPGTGFLTGMFSVLDSLLDQSLDSIVKEMPIEEEVKQALTQGSGTLGQILALN
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
KAYEMADWGQVVTLGQALNLPNEAPTECYIEAVKWTADLLGVQT
HHHHHHHCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]