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The map label for this gene is ychJ [C]

Identifier: 227081981

GI number: 227081981

Start: 1927838

End: 1928293

Strand: Direct

Name: ychJ [C]

Synonym: VCM66_1775

Alternate gene names: 227081981

Gene position: 1927838-1928293 (Clockwise)

Preceding gene: 227081980

Following gene: 227081984

Centisome position: 66.65

GC content: 43.42

Gene sequence:

>456_bases
ATGTCCTGTTATTGCGGAAATACTCAACCTTACTCGCAGTGTTGCGAACCTATTCATCTCAATCCTCACAGTGCTCAAGT
TCCTGAACAGCTGATGCGAGCACGTTTTAGTGCCCATATTTTAAAGAATGTTGAGTTTGTGATTGAAACATACCATCCCT
CTTGCCAAGCCAGTAATGAGCGTGATGCGATTAGCGAATCGGTACATAGCCATTGGCTTCGCCTTGAGATCATTTCGACC
CAAATGGGCGCAACCCCTAACGAAGGTTTTGTTCACTTTAAAGCGTTTCTTGATCAAGAGGGTAAAGTGTTTTGCCTTGA
AGAGCGCTCTCGATTTCTAAAAGAAAATAACTGTTGGTTTTATATTGACGGTGAATTTCCAGCCGCCATCAAACAAGGCC
GTAACGACCCTTGTGCTTGCGGTAGTGGCAAGAAATATAAAAAGTGCTGTGGATAA

Upstream 100 bases:

>100_bases
GTCAAATGGACAGCCGATCTTCTTGGTGTACAAACCTAAACTGGTAATTACGCTTACGGGCCGATAAACTCCATCTACCT
ACTCAACGTTTATCTTTTCT

Downstream 100 bases:

>100_bases
TAGAGTAAAGCCTGCATGCGCAGGCTTTCGCTTATTCTTGATCGACCATCCATTTCTTAAACGCTTTGCGTTCTTCTTTT
GAGGCTTTGCTATACCAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSCYCGNTQPYSQCCEPIHLNPHSAQVPEQLMRARFSAHILKNVEFVIETYHPSCQASNERDAISESVHSHWLRLEIIST
QMGATPNEGFVHFKAFLDQEGKVFCLEERSRFLKENNCWFYIDGEFPAAIKQGRNDPCACGSGKKYKKCCG

Sequences:

>Translated_151_residues
MSCYCGNTQPYSQCCEPIHLNPHSAQVPEQLMRARFSAHILKNVEFVIETYHPSCQASNERDAISESVHSHWLRLEIIST
QMGATPNEGFVHFKAFLDQEGKVFCLEERSRFLKENNCWFYIDGEFPAAIKQGRNDPCACGSGKKYKKCCG
>Mature_150_residues
SCYCGNTQPYSQCCEPIHLNPHSAQVPEQLMRARFSAHILKNVEFVIETYHPSCQASNERDAISESVHSHWLRLEIISTQ
MGATPNEGFVHFKAFLDQEGKVFCLEERSRFLKENNCWFYIDGEFPAAIKQGRNDPCACGSGKKYKKCCG

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=150, Percent_Identity=45.3333333333333, Blast_Score=133, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1775_VIBCM (C3LNF5)

Other databases:

- EMBL:   CP001233
- RefSeq:   YP_002810532.1
- ProteinModelPortal:   C3LNF5
- SMR:   C3LNF5
- GeneID:   7773042
- GenomeReviews:   CP001233_GR
- KEGG:   vcm:VCM66_1775
- OMA:   FTARWHD
- ProtClustDB:   PRK02250
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 17199; Mature: 17067

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
9.3 %Cys+Met (Translated Protein)
7.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCYCGNTQPYSQCCEPIHLNPHSAQVPEQLMRARFSAHILKNVEFVIETYHPSCQASNE
CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
RDAISESVHSHWLRLEIISTQMGATPNEGFVHFKAFLDQEGKVFCLEERSRFLKENNCWF
HHHHHHHHHHHHEEEEEEEHHCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCCCEE
YIDGEFPAAIKQGRNDPCACGSGKKYKKCCG
EECCCCCHHHHCCCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
SCYCGNTQPYSQCCEPIHLNPHSAQVPEQLMRARFSAHILKNVEFVIETYHPSCQASNE
CCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
RDAISESVHSHWLRLEIISTQMGATPNEGFVHFKAFLDQEGKVFCLEERSRFLKENNCWF
HHHHHHHHHHHHEEEEEEEHHCCCCCCCCEEEEEEEECCCCCEEEHHHHHHHHHCCCCEE
YIDGEFPAAIKQGRNDPCACGSGKKYKKCCG
EECCCCCHHHHCCCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA