| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is frwBC [H]
Identifier: 227081950
GI number: 227081950
Start: 1897940
End: 1899343
Strand: Direct
Name: frwBC [H]
Synonym: VCM66_1744
Alternate gene names: 227081950
Gene position: 1897940-1899343 (Clockwise)
Preceding gene: 227081949
Following gene: 227081952
Centisome position: 65.62
GC content: 49.79
Gene sequence:
>1404_bases ATGAGTACCCTAACCGCTCAAGCTACCAATAATAGTAGCAATTTCAAAAAACTCCTCAGTACCATGAAAGGCCACCTTTT ATTTGGCACCTCACATATGTTGCCATTTATTGTTGCTGGCGGCGTATTATTGGCACTTGCGGTAATGGCATCCGGCAAAG GTGCCGTTCCTGCCGATGGCTTATTAGCGGATATTTCCAATATCGGTATTAAAGGTCTGGTGCTGTTCCCGATTATTTTG GGTGGTTTCATCGGTTATTCCATTGCAGACAAACCAGCTCTTGCGCCAGCGATGATCTCTTCTGGCATCATGGCGGATAT GGGCGGCGGTTTCCTTGGTTGTATCGTAGCGGGCTTCATCGCCGGTGGTGTGGTATTCCAACTTAAGAAGATCCCTCTTT CGGCTAACATGACTGCGTTGGGCGCTTACTTCATCTACCCACTTATCGGTACACTTATCTCCGCAGGCATCGTTTTATGG GGTATCGGTGAGCCAATCAAACTGTTCATGGCGTCTATGAACGAATTCCTAGCTTCTATGGCTGGCGCTTCTAAAGTGGT GTTAGGTGCGATTCTTGGTGGTATGACGGCATTCGATATGGGCGGTCCAATCAACAAGGTCGCAACGCTATTCGCTCAAA CTCAAGTGGATACTCAACCATGGCTAATGGGTGGTGTGGGCATCGCAATCTGTACGCCTCCTCTCGGCATGGCGCTAGCC ACGTTCCTGTTCAAGAAAAAATTCACCAAACAAGAACAAGAAGCAGGTAAAGCAGCAGCAATCATGGGTTCTATCGGTAT CTCTGAAGGCGCTATCCCATTCGCAGCAAATGACCCAATGCGCGTGCTTCCTTCCATCGTTGCTGGTGGTATCGTTGGCT GTGTGTTTGGCTTCCTGACTAACGTTCTGCTTCATGCTCCTTGGGGCGGTCTCATCACAGCACCGGTATCAAGCAACATT CCAATGTACGTTGTAGGTATCGCACTAGGCTCACTCACCACTGCACTCATCGTTGGCTTCTGGAAACCAGTCGCGGAAGA AGAAGTGGAAGACGAAATCGCAGAAGCTGCACCAACGCAAGCTCAAGCGGCTCCAGCAGCCGGCGAAGGCGAGTACGATA TCGTTGCTGTCACCTGTTGCCCATCTGGTGTAGCACACACTTTCATGGCAGCCAAAGCACTTGAGAAAGCAGGCGCAGCC GCTGGCAGCAAAATCAAAGTCGAAACGCAAGGTCAAAATGGCATTAAAAACCGCATCACTGACCTAGATGTCGCAAACGC GAAGCTAGTTATCCTCGCTCACGATATCCAAGTGAAAGATGCTCACCGCTTTGCCAACGCGAAAGTCATCGAATGCTCGA CCAAGGAGGCGATGAAAAAAGCCGCCGAACTTATCCAAGCTTAA
Upstream 100 bases:
>100_bases TATTCGGAAAATTTAGCGAAGAATTTATTGAAGATATTCATAACGCAAAAAATGAACATCAGATCCTTAATATTTCAATT CAATCATAAGGCGTGAAATT
Downstream 100 bases:
>100_bases ACCTTAAGCTCCTCCCCCAGAGCCCTTTCCCCCAAAGGGCTCATTTTCTATCTCAAGTGTAGTGATTCAGAATGTTATCG CTTTATCTGCACCAATGCCG
Product: PTS system, fructose-specific IIBC component
Products: protein histidine; sugar phosphate
Alternate protein names: PTS system fructose-like EIIC component 2 [H]
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MSTLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLADISNIGIKGLVLFPIIL GGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAGGVVFQLKKIPLSANMTALGAYFIYPLIGTLISAGIVLW GIGEPIKLFMASMNEFLASMAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWLMGGVGIAICTPPLGMALA TFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGGLITAPVSSNI PMYVVGIALGSLTTALIVGFWKPVAEEEVEDEIAEAAPTQAQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAA AGSKIKVETQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAELIQA
Sequences:
>Translated_467_residues MSTLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLADISNIGIKGLVLFPIIL GGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAGGVVFQLKKIPLSANMTALGAYFIYPLIGTLISAGIVLW GIGEPIKLFMASMNEFLASMAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWLMGGVGIAICTPPLGMALA TFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGGLITAPVSSNI PMYVVGIALGSLTTALIVGFWKPVAEEEVEDEIAEAAPTQAQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAA AGSKIKVETQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAELIQA >Mature_466_residues STLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADGLLADISNIGIKGLVLFPIILG GFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFIAGGVVFQLKKIPLSANMTALGAYFIYPLIGTLISAGIVLWG IGEPIKLFMASMNEFLASMAGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWLMGGVGIAICTPPLGMALAT FLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLTNVLLHAPWGGLITAPVSSNIP MYVVGIALGSLTTALIVGFWKPVAEEEVEDEIAEAAPTQAQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAA GSKIKVETQGQNGIKNRITDLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAELIQA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790386, Length=308, Percent_Identity=46.4285714285714, Blast_Score=266, Evalue=3e-72, Organism=Escherichia coli, GI1788492, Length=358, Percent_Identity=39.6648044692737, Blast_Score=198, Evalue=5e-52, Organism=Escherichia coli, GI1786951, Length=338, Percent_Identity=32.5443786982249, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI87082348, Length=356, Percent_Identity=31.1797752808989, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI1788729, Length=388, Percent_Identity=27.0618556701031, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1790387, Length=88, Percent_Identity=52.2727272727273, Blast_Score=92, Evalue=6e-20, Organism=Escherichia coli, GI1788730, Length=93, Percent_Identity=44.0860215053763, Blast_Score=86, Evalue=8e-18, Organism=Escherichia coli, GI1790390, Length=94, Percent_Identity=38.2978723404255, Blast_Score=75, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013014 - InterPro: IPR006327 [H]
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 47864; Mature: 47733
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADG CCCEEECCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LLADISNIGIKGLVLFPIILGGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFI HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCHHHHHHHHHHH AGGVVFQLKKIPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASM HCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH AGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWLMGGVGIAICTPPLGMALA CCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHH TFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLT HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NVLLHAPWGGLITAPVSSNIPMYVVGIALGSLTTALIVGFWKPVAEEEVEDEIAEAAPTQ HHHHHCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC AQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRIT HHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCC DLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAELIQA CCCCCCEEEEEEEECCEEHHHHHHCCCEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure STLTAQATNNSSNFKKLLSTMKGHLLFGTSHMLPFIVAGGVLLALAVMASGKGAVPADG CCEEECCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LLADISNIGIKGLVLFPIILGGFIGYSIADKPALAPAMISSGIMADMGGGFLGCIVAGFI HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHCCCHHHHHHHHHHH AGGVVFQLKKIPLSANMTALGAYFIYPLIGTLISAGIVLWGIGEPIKLFMASMNEFLASM HCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHH AGASKVVLGAILGGMTAFDMGGPINKVATLFAQTQVDTQPWLMGGVGIAICTPPLGMALA CCCHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHH TFLFKKKFTKQEQEAGKAAAIMGSIGISEGAIPFAANDPMRVLPSIVAGGIVGCVFGFLT HHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH NVLLHAPWGGLITAPVSSNIPMYVVGIALGSLTTALIVGFWKPVAEEEVEDEIAEAAPTQ HHHHHCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCC AQAAPAAGEGEYDIVAVTCCPSGVAHTFMAAKALEKAGAAAGSKIKVETQGQNGIKNRIT HHCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCC DLDVANAKLVILAHDIQVKDAHRFANAKVIECSTKEAMKKAAELIQA CCCCCCEEEEEEEECCEEHHHHHHCCCEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]