| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
Click here to switch to the map view.
The map label for this gene is 227081947
Identifier: 227081947
GI number: 227081947
Start: 1895522
End: 1895623
Strand: Reverse
Name: 227081947
Synonym: VCM66_1741
Alternate gene names: NA
Gene position: 1895623-1895522 (Counterclockwise)
Preceding gene: 227081951
Following gene: 227081946
Centisome position: 65.54
GC content: 45.1
Gene sequence:
>102_bases TTGTTTTCGGTTTGGGTGTTACACAGTGTCGAAATGCACTGCTTTATCCCTTTCCTACTTGAAGTGGCAACTCCAAGTGG TTCGGGTATTCCAACGCGATAA
Upstream 100 bases:
>100_bases GGTTTAACCCATTGGCCGCCAATGAAATTATCGTAATGGCTCTTGAAGGTGATAACGGCGTTGTCACTACCCGGTTGTGC ATAAATCATAACTCGTCCTT
Downstream 100 bases:
>100_bases CGCAAATCACAGGCCAACATAAATGAACTTGTTGTTAATCTTGTGTAACGCTATGGTTAACAAAAGGATCGCAAGTAACA GACAAGGTTGCCGTACTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 33; Mature: 33
Protein sequence:
>33_residues MFSVWVLHSVEMHCFIPFLLEVATPSGSGIPTR
Sequences:
>Translated_33_residues MFSVWVLHSVEMHCFIPFLLEVATPSGSGIPTR >Mature_33_residues MFSVWVLHSVEMHCFIPFLLEVATPSGSGIPTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3689; Mature: 3689
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSVWVLHSVEMHCFIPFLLEVATPSGSGIPTR CCEEEEEECCCHHHHHHHHHEECCCCCCCCCCC >Mature Secondary Structure MFSVWVLHSVEMHCFIPFLLEVATPSGSGIPTR CCEEEEEECCCHHHHHHHHHEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA