| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is frwABC [H]
Identifier: 227081951
GI number: 227081951
Start: 1899418
End: 1901283
Strand: Reverse
Name: frwABC [H]
Synonym: VCM66_1745
Alternate gene names: 227081951
Gene position: 1901283-1899418 (Counterclockwise)
Preceding gene: 227081954
Following gene: 227081947
Centisome position: 65.73
GC content: 49.46
Gene sequence:
>1866_bases GTGGATATTACCCATCTGATCGAACCTGAAATCATCTGTTTAGATCTAAAAGCCAATAACAAAGAAGATGTTCTGATTGA GCTGGTTGAGTTGCTCGATAACGCAGGAAAGTTGACCGATAAGCAGCAATTTTTAAACGACATTTGGCGACGAGAAGAGA TCGGAAATACAGGGTTTGAAGAAGGAATAGCCATTCCACACGCCAAAAGTGCTGCGGTGGCGTTGCCTGCAGTCGTCGTG GGTATTAGCCGCCAAGGGATCGATTACGGTGCAGAAGATGGTCAGCTTTCTGATGTGTTTTTTATGCTGGCATCACCGGA TGGAGAAGATCATCACCACATTGAAGTATTGGCACAAATCTCCAGTAAATTGATTGAAGAGGGATTTGTTGAACAGCTCA AAGCCGCAGAAAGTGTTGAGCAGGCACTCGCCCTTTTTATTCACCCACAGCACTCAACATTAAGCTCTACACAGGTAATG GATTATGCCGATTACCAGCCGCTAAGCCCAATGGCACAAAGATTAGCTCGCGTTAAAGAGCATCTATTATTTGGTACCTC TCACATGATGCCGTTTATCGTGGCGGGTGGGGTATTACTCTCGCTTTCAGTGATGATGTCTGGTCACGGAGCGGTGCCAG AAGAGGGCGTGTTGGCGGATATCGCTCAAATGGGTATTGCCGGTTTAACCCTATTTACGGTGGTATTGGGTGGTTATATC GCTTACTCGATGGCAGATAAACCCGGTTTGGCCCCCGACATGATTGGCACCTGGATTGCGATAAACCAATATCAAACCGG CTTTATTGGCGCGATCATCGTGGGTTTTTTTGCAGGCTTTGTGGTTCGTCAGCTGAAAAGAATCGCTCTCCCCGACAGCA TGAGTTCGCTGGGTTCCATCTTCATCTATCCGCTGGTGGGGACGTTTGTAACCTGTGGTGCTGTGATGTGGTTAATCGGT GCACCGATTGCCAGCAGTATGCTGTGGCTCAATCAATTTTTGGCATCGATGGCCGATTCCGGCAAAGTGGTGCTCGGAGC GGTATTGGGGGCGATGACTGCCTTTGACATGGGCGGCCCAATCAATAAAGTCGCCACGCTGTTTGCCCAAACTCAAGTCA ACACCCAACCTTGGCTAATGGGTGGGGTGGGGATTGCCATTTGTACCCCACCATTGGGGATGGCGCTTGCGACCTTATTG TCACCAAGTAAATTCAAACGGGATGAACGTGAAGCCGGAAAAGCGGCAGGCATCATGGGTATGATTGGCATTAGTGAAGG GGCGATTCCGTTTGCCGCCGCTGATCCCGCGCGCGTACTCCCTGCAATTATTGCGGGTGGTATTGTTGGCAACGTGATTG GTTTTCTCTTTCAAGTGCTCAATCATGCCCCTTGGGGCGGTTGGATTGTGCTGCCCGTTGTGGACGGCAAGTTAGGGTAT ATTCTTGGCACTATCGCCGGTGCATTAGCCACGGCACTGATTGCTATTGCCCTGAAGAAAACGGTGCATGAGCAGGACAA TGAGCAGGGGCAGTCACTTGCTTTTTCATCGGTTATTGGAGAAGGGCAAGCCGACATTCTTGCCGTCACCTCGTGCCCTT CTGGCGTTGCTCATACGTTTTTAGCGGCTAAATCACTTGAAAAAGCCGCCTGTCTGGCGGGAGTGAAAATCAAAGTAGAA ACACAAGGCGCCAACGGTATCATCAATCGAATCACGGCCAAAGATGTGCAACGAGCGAAGCTGGTGATCTTTGCGCACGA TGTGGCGATTAAAGAACCAGAACGCTTCAAGCACATTAAAGTCATTGACGTGACAACGAAAGACGCGATTTTAAATGCCG CGGCATTGGTGCAGATAAAGCGATAA
Upstream 100 bases:
>100_bases GCATCTTTTGTCCTGTGTCTTGAAAGAGTATCGCTCGTTACTCTAGCGAGGCGCATCGGTATGGCAATGCCAATTCAAAC AACAGTAAGGTAAAACAATT
Downstream 100 bases:
>100_bases CATTCTGAATCACTACACTTGAGATAGAAAATGAGCCCTTTGGGGGAAAGGGCTCTGGGGGAGGAGCTTAAGGTTTAAGC TTGGATAAGTTCGGCGGCTT
Product: PTS system, fructose-specific IIABC component
Products: protein histidine; sugar phosphate
Alternate protein names: PTS system fructose-like EIIC component 2 [H]
Number of amino acids: Translated: 621; Mature: 621
Protein sequence:
>621_residues MDITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFEEGIAIPHAKSAAVALPAVVV GISRQGIDYGAEDGQLSDVFFMLASPDGEDHHHIEVLAQISSKLIEEGFVEQLKAAESVEQALALFIHPQHSTLSSTQVM DYADYQPLSPMAQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTVVLGGYI AYSMADKPGLAPDMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKRIALPDSMSSLGSIFIYPLVGTFVTCGAVMWLIG APIASSMLWLNQFLASMADSGKVVLGAVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATLL SPSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPVVDGKLGY ILGTIAGALATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVE TQGANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALVQIKR
Sequences:
>Translated_621_residues MDITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFEEGIAIPHAKSAAVALPAVVV GISRQGIDYGAEDGQLSDVFFMLASPDGEDHHHIEVLAQISSKLIEEGFVEQLKAAESVEQALALFIHPQHSTLSSTQVM DYADYQPLSPMAQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTVVLGGYI AYSMADKPGLAPDMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKRIALPDSMSSLGSIFIYPLVGTFVTCGAVMWLIG APIASSMLWLNQFLASMADSGKVVLGAVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATLL SPSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPVVDGKLGY ILGTIAGALATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVE TQGANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALVQIKR >Mature_621_residues MDITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFEEGIAIPHAKSAAVALPAVVV GISRQGIDYGAEDGQLSDVFFMLASPDGEDHHHIEVLAQISSKLIEEGFVEQLKAAESVEQALALFIHPQHSTLSSTQVM DYADYQPLSPMAQRLARVKEHLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTVVLGGYI AYSMADKPGLAPDMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKRIALPDSMSSLGSIFIYPLVGTFVTCGAVMWLIG APIASSMLWLNQFLASMADSGKVVLGAVLGAMTAFDMGGPINKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATLL SPSKFKRDEREAGKAAGIMGMIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPVVDGKLGY ILGTIAGALATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQADILAVTSCPSGVAHTFLAAKSLEKAACLAGVKIKVE TQGANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIKVIDVTTKDAILNAAALVQIKR
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane [H]
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1790386, Length=318, Percent_Identity=46.2264150943396, Blast_Score=274, Evalue=2e-74, Organism=Escherichia coli, GI1788492, Length=329, Percent_Identity=42.5531914893617, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1786951, Length=348, Percent_Identity=31.3218390804598, Blast_Score=144, Evalue=2e-35, Organism=Escherichia coli, GI87082348, Length=294, Percent_Identity=31.9727891156463, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI1788729, Length=378, Percent_Identity=25.9259259259259, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1788730, Length=93, Percent_Identity=46.2365591397849, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1790387, Length=92, Percent_Identity=48.9130434782609, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI2367327, Length=146, Percent_Identity=33.5616438356164, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1790390, Length=82, Percent_Identity=40.2439024390244, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788726, Length=145, Percent_Identity=29.6551724137931, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013014 - InterPro: IPR006327 [H]
Pfam domain/function: NA
EC number: 2.7.1.69
Molecular weight: Translated: 65755; Mature: 65755
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS51094 PTS_EIIA_TYPE_2 ; PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFE CCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC EGIAIPHAKSAAVALPAVVVGISRQGIDYGAEDGQLSDVFFMLASPDGEDHHHIEVLAQI CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH SSKLIEEGFVEQLKAAESVEQALALFIHPQHSTLSSTQVMDYADYQPLSPMAQRLARVKE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHH HLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTVVLGGYI HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYSMADKPGLAPDMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKRIALPDSMSSLGSI HHHCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLGAMTAFDMGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC INKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATLLSPSKFKRDEREAGKAAGIMG HHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHHHHHCCHHHCCHHHHHHHHHCCEE MIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPVVDGKLGY EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHH ILGTIAGALATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQADILAVTSCPSGVAHTF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH LAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIK HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHHCCEE VIDVTTKDAILNAAALVQIKR EEEECHHHHHHHHHHHEEECC >Mature Secondary Structure MDITHLIEPEIICLDLKANNKEDVLIELVELLDNAGKLTDKQQFLNDIWRREEIGNTGFE CCCCHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCC EGIAIPHAKSAAVALPAVVVGISRQGIDYGAEDGQLSDVFFMLASPDGEDHHHIEVLAQI CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHH SSKLIEEGFVEQLKAAESVEQALALFIHPQHSTLSSTQVMDYADYQPLSPMAQRLARVKE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHH HLLFGTSHMMPFIVAGGVLLSLSVMMSGHGAVPEEGVLADIAQMGIAGLTLFTVVLGGYI HHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYSMADKPGLAPDMIGTWIAINQYQTGFIGAIIVGFFAGFVVRQLKRIALPDSMSSLGSI HHHCCCCCCCCHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FIYPLVGTFVTCGAVMWLIGAPIASSMLWLNQFLASMADSGKVVLGAVLGAMTAFDMGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC INKVATLFAQTQVNTQPWLMGGVGIAICTPPLGMALATLLSPSKFKRDEREAGKAAGIMG HHHHHHHHHHHCCCCCCEEECCCEEEEECCCHHHHHHHHHCCHHHCCHHHHHHHHHCCEE MIGISEGAIPFAAADPARVLPAIIAGGIVGNVIGFLFQVLNHAPWGGWIVLPVVDGKLGY EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHH ILGTIAGALATALIAIALKKTVHEQDNEQGQSLAFSSVIGEGQADILAVTSCPSGVAHTF HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHH LAAKSLEKAACLAGVKIKVETQGANGIINRITAKDVQRAKLVIFAHDVAIKEPERFKHIK HHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEEEECCCCCCCHHHCCEE VIDVTTKDAILNAAALVQIKR EEEECHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 7773398 [H]