| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081881
Identifier: 227081881
GI number: 227081881
Start: 1818942
End: 1819145
Strand: Direct
Name: 227081881
Synonym: VCM66_1673
Alternate gene names: NA
Gene position: 1818942-1819145 (Clockwise)
Preceding gene: 227081879
Following gene: 227081882
Centisome position: 62.88
GC content: 43.14
Gene sequence:
>204_bases ATGTTGTGTTTCCTTGCGCCGCTGAAAGTCCTTGTGGTAATGGGTCGCGGCGAAAATTCTTCGTATCCGCAGACTAACCA AATTCATGCGCTAGCGCTAGCCTTTATCTTGCTCGCAATGAATTTTTATTTCTGTTTATGCAATCTCGACCAAGCCTGGG ATTTTCCAAGCATCAAGATTGGCAAACTTCATCAAAATCACTAA
Upstream 100 bases:
>100_bases CAGCCAGCAAGAGCGCACGGTTTGAAACGCTTTTGGAACCGGGAAGATTCACTTCCCCAGAGATGAGTTCAATCGGTTGT AGAGTCAAACTTTCCATTGG
Downstream 100 bases:
>100_bases GATCGCGGCTCATTCACTTTCGGAATGGCTCACAGGGACTTCTAAGGCAAACCAATACGATGGCTATTTATCTGACTGAA TTATCGCCGGAAACGTTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 67; Mature: 67
Protein sequence:
>67_residues MLCFLAPLKVLVVMGRGENSSYPQTNQIHALALAFILLAMNFYFCLCNLDQAWDFPSIKIGKLHQNH
Sequences:
>Translated_67_residues MLCFLAPLKVLVVMGRGENSSYPQTNQIHALALAFILLAMNFYFCLCNLDQAWDFPSIKIGKLHQNH >Mature_67_residues MLCFLAPLKVLVVMGRGENSSYPQTNQIHALALAFILLAMNFYFCLCNLDQAWDFPSIKIGKLHQNH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7610; Mature: 7610
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCFLAPLKVLVVMGRGENSSYPQTNQIHALALAFILLAMNFYFCLCNLDQAWDFPSIKI CEEHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE GKLHQNH CCCCCCC >Mature Secondary Structure MLCFLAPLKVLVVMGRGENSSYPQTNQIHALALAFILLAMNFYFCLCNLDQAWDFPSIKI CEEHHHHHHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE GKLHQNH CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA