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The map label for this gene is yciN [H]

Identifier: 227081879

GI number: 227081879

Start: 1817319

End: 1817567

Strand: Direct

Name: yciN [H]

Synonym: VCM66_1671

Alternate gene names: 227081879

Gene position: 1817319-1817567 (Clockwise)

Preceding gene: 227081877

Following gene: 227081881

Centisome position: 62.83

GC content: 38.15

Gene sequence:

>249_bases
ATGAGCCATAAAAAACCGATCACTGAATTTGAACTTTTACTGATTGCTAACCAGTTAATTCAAGATCATGAGTGTTATAT
CGAAGGCATGCGTGCCACTCAAGTGGAAGAGAAAGAAGGCGTGTTAGTGTTTAAAGGTGAGTATTTCCTCACTGAACAAG
GCCTTCCTACTGAGAAAACCACAGCGGTATTTAATATGTTTAAATATCTCGCTCATCATCTCTCACCGGAATTTACCCTA
CAAAAATAA

Upstream 100 bases:

>100_bases
ATTCATCTAGAGAACAAATCGCCCTTTTCCTGCTTTCTGTCAAGGTTGTCACCGGTTACCTACTTATAATGCCTGCATCC
AATGGTAAGGAGTTATCACC

Downstream 100 bases:

>100_bases
TAAAAGCCTCGTAATGAGGCTTTTTTCAATCACTTACATCTATTCCGAAACCGATTTTATCGCCATCGGTTTTGGGCAGA
GAGTGACACTTTAGCGGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MSHKKPITEFELLLIANQLIQDHECYIEGMRATQVEEKEGVLVFKGEYFLTEQGLPTEKTTAVFNMFKYLAHHLSPEFTL
QK

Sequences:

>Translated_82_residues
MSHKKPITEFELLLIANQLIQDHECYIEGMRATQVEEKEGVLVFKGEYFLTEQGLPTEKTTAVFNMFKYLAHHLSPEFTL
QK
>Mature_81_residues
SHKKPITEFELLLIANQLIQDHECYIEGMRATQVEEKEGVLVFKGEYFLTEQGLPTEKTTAVFNMFKYLAHHLSPEFTLQ
K

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787528, Length=76, Percent_Identity=56.578947368421, Blast_Score=88, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019633 [H]

Pfam domain/function: PF10692 DUF2498 [H]

EC number: NA

Molecular weight: Translated: 9560; Mature: 9429

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHKKPITEFELLLIANQLIQDHECYIEGMRATQVEEKEGVLVFKGEYFLTEQGLPTEKT
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHH
TAVFNMFKYLAHHLSPEFTLQK
HHHHHHHHHHHHHCCCCEEECC
>Mature Secondary Structure 
SHKKPITEFELLLIANQLIQDHECYIEGMRATQVEEKEGVLVFKGEYFLTEQGLPTEKT
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHH
TAVFNMFKYLAHHLSPEFTLQK
HHHHHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]