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The map label for this gene is ynjF [H]

Identifier: 227081818

GI number: 227081818

Start: 1746070

End: 1746690

Strand: Direct

Name: ynjF [H]

Synonym: VCM66_1607

Alternate gene names: 227081818

Gene position: 1746070-1746690 (Clockwise)

Preceding gene: 227081817

Following gene: 227081821

Centisome position: 60.36

GC content: 49.28

Gene sequence:

>621_bases
ATGCTTGATCGCTACGCGATAAAAATCATTCGCTGGCCACTTCATCAAGCCGCAGGATTGCTGGATGAAGCGGGCGTCAC
CGCCAATCAAACCACGGTATTCGGCTTTGTGATTGGGGCATTAGCATTACCTGCGCTTGCAATGCAGCAATACTGGCTCG
CCTTGTTATTGATTGTGGTTAATCGGATCTGTGATGGACTGGATGGTGCCCTCGCGCGCCGCCAAGGGCTGACAGATGCG
GGAGGATTTCTCGATATTAGCCTCGACTTTCTGTTCTACTCTTTAGTGCCGTTTGGCTTTGTCCTTGCAAACCCAGAACA
TAACGCGGTCGCGGGCGCTTTCTTGATTTTTGCTTTTATCGGGACGGGTAGTAGCTTTCTTGCTTTTGCAGTCATGGCCA
GTAAACGTAACATCACCAATCCGGTGTATCAGCACAAATCCTTGTATTACATGAGCGGTCTGACAGAGGGCACGGAAACC
ATCGCCTGCTTCATGTTGATGTGTTTATTGCCTCACTCTTTTTCAACCCTAGCTTGGCTGTTTGGTGCTGCCTGTTGGTT
TACTACGGCAACCCGCATCTATTACGGTTTTCAAACCTTGCAACACGTCGAACAAAGGTAA

Upstream 100 bases:

>100_bases
GGGATCCCAACACTCATGGTCACTCATGATCATGAGGATGTGCCAGTGGGCAGTCGTGTCATTGAATGGCCCGTCATTGA
GCAAGAAACAGAGGTAAACC

Downstream 100 bases:

>100_bases
AGTTCGCGCCCTCAACGTGAGTTGATCGACACGTTGAGGGCACAATGAGAACGCTCGCCTACTCTTTCACCACCACTTTC
AGCGCTGGCCAAGGTAAATC

Product: putative Inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLDRYAIKIIRWPLHQAAGLLDEAGVTANQTTVFGFVIGALALPALAMQQYWLALLLIVVNRICDGLDGALARRQGLTDA
GGFLDISLDFLFYSLVPFGFVLANPEHNAVAGAFLIFAFIGTGSSFLAFAVMASKRNITNPVYQHKSLYYMSGLTEGTET
IACFMLMCLLPHSFSTLAWLFGAACWFTTATRIYYGFQTLQHVEQR

Sequences:

>Translated_206_residues
MLDRYAIKIIRWPLHQAAGLLDEAGVTANQTTVFGFVIGALALPALAMQQYWLALLLIVVNRICDGLDGALARRQGLTDA
GGFLDISLDFLFYSLVPFGFVLANPEHNAVAGAFLIFAFIGTGSSFLAFAVMASKRNITNPVYQHKSLYYMSGLTEGTET
IACFMLMCLLPHSFSTLAWLFGAACWFTTATRIYYGFQTLQHVEQR
>Mature_206_residues
MLDRYAIKIIRWPLHQAAGLLDEAGVTANQTTVFGFVIGALALPALAMQQYWLALLLIVVNRICDGLDGALARRQGLTDA
GGFLDISLDFLFYSLVPFGFVLANPEHNAVAGAFLIFAFIGTGSSFLAFAVMASKRNITNPVYQHKSLYYMSGLTEGTET
IACFMLMCLLPHSFSTLAWLFGAACWFTTATRIYYGFQTLQHVEQR

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=206, Percent_Identity=60.6796116504854, Blast_Score=233, Evalue=8e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: NA

Molecular weight: Translated: 22709; Mature: 22709

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRYAIKIIRWPLHQAAGLLDEAGVTANQTTVFGFVIGALALPALAMQQYWLALLLIVV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRICDGLDGALARRQGLTDAGGFLDISLDFLFYSLVPFGFVLANPEHNAVAGAFLIFAFI
HHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
GTGSSFLAFAVMASKRNITNPVYQHKSLYYMSGLTEGTETIACFMLMCLLPHSFSTLAWL
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
FGAACWFTTATRIYYGFQTLQHVEQR
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDRYAIKIIRWPLHQAAGLLDEAGVTANQTTVFGFVIGALALPALAMQQYWLALLLIVV
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRICDGLDGALARRQGLTDAGGFLDISLDFLFYSLVPFGFVLANPEHNAVAGAFLIFAFI
HHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHH
GTGSSFLAFAVMASKRNITNPVYQHKSLYYMSGLTEGTETIACFMLMCLLPHSFSTLAWL
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHH
FGAACWFTTATRIYYGFQTLQHVEQR
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]