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The map label for this gene is ynfM [H]

Identifier: 227081771

GI number: 227081771

Start: 1678782

End: 1679999

Strand: Direct

Name: ynfM [H]

Synonym: VCM66_1558

Alternate gene names: 227081771

Gene position: 1678782-1679999 (Clockwise)

Preceding gene: 227081769

Following gene: 227081772

Centisome position: 58.04

GC content: 49.84

Gene sequence:

>1218_bases
ATGATTGAACTGCATTCTCCCCAATATTTAAAAGTGACCTTTGCCCTCGCCTTCGGCTCATTTTTAGTTTTCTGCAATCT
TTATCTTTTCCAACCCATGCTGCCTTATTTGGCGAATCACTTTGCGGTTTCGGAAACCCAAATTAACTGGTTGTTTGCAG
CTTCAACCTTAGCCTTATCGCTTTGTCTCGTGCCTTGGGCGGTCACTTCGGAAGCCGTTGGGCGACGCTTAGTGATGCTG
ACCGGCTTATTTGCTATGCCTGTGATTGGCTTAGCCATGCTTTATGCTGAGCAATTTTGGTTTTTAGTGCTCACCCGCGC
TTTAATGGGGGTGGCTTTAGCGGCTTTTGCTTCGGTTGCGGTGGCGTACATGGTGGAAGAGCTTTCTCCGCAAGCGTTTG
GTAAGGCGATTGGTGGCTATATCGCGGCAAACTCATTGGGCGGTATTACCGGCCGCATTGCTGGAGGGTTACTCACCGAT
GCCCTTGGCTGGCAACATGCGGTCGTTGCGATGGCCATTTTTACTCTGCTCGGCGCGCTTTTGGTCGCGTATTTGCTGCC
CATTCAACAGCATTTTAAACCGCAACGTGGGCTGTTTTTCCATCACAATCGTGCGTTAGTCAAACATCTGCAAAACCGCA
CACTCTGGCTAGCTATGTTGATTGGCGGTGTTAACTTCGCACTGTTTGTTAACCTCTATTCCGTGATGGGATTTCGTTTA
GTCGCCGAACCCTACTCACTGCCCATAGGTATTGCTTCACTGATTTTCGTCTGTTATTTAGCTGGAACACTGAGCTCAAA
GCTCACCGCCAACTGGAACCGGCGTTTCTCGGCGATTCCCGGCATGATGCTTGGCGCACTCATCAGTATGGCAGGCATGT
TGATTGCGTTGATTGAAGCGATACCCGCCATGCTGGTCGGCTTGATTTTGATTAGCTTCGGCGCCTTTTTCACCCATACT
TTGGCTTACGCTTGGGTCAGTCAAAAAGCCACACAAGCCAAAGCCACCGCGACTGCACTTTACTTGGTTCACTATTATAT
TGGCGGTAGTTTAGGCGGTTTTTACCTGCTGTACTGTTGGCAACACGGTGGTTGGGAAATGGTCACACTCGGCGGGTTGG
GGCTTTACTTCATCTTGTTTATCCTTGGTTGGCGCTTAAGCCGACAAAATAAACAAACGCCACAGGGCAGTCAGGCTTTG
GCCAGCCCTTCGGCCTAA

Upstream 100 bases:

>100_bases
ATCCTGTATATCGCAACCATATTTTTAATATATTTCATTAATCGAGATGCCACTGCTATCGTGATCACATCACCGCCTTT
TTGCATCTTGGATCCGCTGT

Downstream 100 bases:

>100_bases
GTTGTGCTATGCTCAGCGCCAAATGATAAATGTAAAACGAAGAATCTGAGCTCAACATGTCAACGGAAACCATTATTCAA
GAAGTCGATCATTGGCTTAA

Product: putative multidrug resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MIELHSPQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRRLVML
TGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTD
ALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFKPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRL
VAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIALIEAIPAMLVGLILISFGAFFTHT
LAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLYCWQHGGWEMVTLGGLGLYFILFILGWRLSRQNKQTPQGSQAL
ASPSA

Sequences:

>Translated_405_residues
MIELHSPQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRRLVML
TGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTD
ALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFKPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRL
VAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIALIEAIPAMLVGLILISFGAFFTHT
LAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLYCWQHGGWEMVTLGGLGLYFILFILGWRLSRQNKQTPQGSQAL
ASPSA
>Mature_405_residues
MIELHSPQYLKVTFALAFGSFLVFCNLYLFQPMLPYLANHFAVSETQINWLFAASTLALSLCLVPWAVTSEAVGRRLVML
TGLFAMPVIGLAMLYAEQFWFLVLTRALMGVALAAFASVAVAYMVEELSPQAFGKAIGGYIAANSLGGITGRIAGGLLTD
ALGWQHAVVAMAIFTLLGALLVAYLLPIQQHFKPQRGLFFHHNRALVKHLQNRTLWLAMLIGGVNFALFVNLYSVMGFRL
VAEPYSLPIGIASLIFVCYLAGTLSSKLTANWNRRFSAIPGMMLGALISMAGMLIALIEAIPAMLVGLILISFGAFFTHT
LAYAWVSQKATQAKATATALYLVHYYIGGSLGGFYLLYCWQHGGWEMVTLGGLGLYFILFILGWRLSRQNKQTPQGSQAL
ASPSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787880, Length=392, Percent_Identity=30.6122448979592, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR005829 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 44116; Mature: 44116

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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ECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure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ECCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]