| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081769
Identifier: 227081769
GI number: 227081769
Start: 1677543
End: 1677776
Strand: Direct
Name: 227081769
Synonym: VCM66_1556
Alternate gene names: NA
Gene position: 1677543-1677776 (Clockwise)
Preceding gene: 227081765
Following gene: 227081771
Centisome position: 58.0
GC content: 44.02
Gene sequence:
>234_bases ATGAAACGCGTGGTTTTGTACATAAAAGATAAATGCCCACATTGCAAAGACGCCCAGCGTTATCTTGACTCAAAAGGCAT TAAGTACCGCTTATGCAACGCAAAAATGGAACGCGGCCGCAAAGAGCTTGATGCTCTCGGCGCTCGCAGTGTACCGGTAC TAAAAATTGGTGATCGTTTGATGATCGGCTGGAACCACACCAATTTTGAACGTATTTACAGCAGTAAAGATTAA
Upstream 100 bases:
>100_bases TACACCAATAAGTATGATCGCTTCAAGTAGGAAGGGGATATTTGCATCTCCAGCCGACTCTCGTTACACTTTGCGCCCTT TTGATTCATGAGAGATTCCA
Downstream 100 bases:
>100_bases TAGCAGCAAAGATGAATGCTCTTCTTGGCGCTAAACGTACTTTTTCACAAACTCGATGAAAGTACGATCGGCATTGGAAA GATAACCTTCTTTACGCCAA
Product: putative glutaredoxin
Products: NA
Alternate protein names: Glutaredoxin-Like Protein; Glutaredoxin Family Protein
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKRVVLYIKDKCPHCKDAQRYLDSKGIKYRLCNAKMERGRKELDALGARSVPVLKIGDRLMIGWNHTNFERIYSSKD
Sequences:
>Translated_77_residues MKRVVLYIKDKCPHCKDAQRYLDSKGIKYRLCNAKMERGRKELDALGARSVPVLKIGDRLMIGWNHTNFERIYSSKD >Mature_77_residues MKRVVLYIKDKCPHCKDAQRYLDSKGIKYRLCNAKMERGRKELDALGARSVPVLKIGDRLMIGWNHTNFERIYSSKD
Specific function: Unknown
COG id: COG0695
COG function: function code O; Glutaredoxin and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9029; Mature: 9029
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: PS00195 GLUTAREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRVVLYIKDKCPHCKDAQRYLDSKGIKYRLCNAKMERGRKELDALGARSVPVLKIGDRL CCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHCCHHHHHHCCCCCCCEEEECCEE MIGWNHTNFERIYSSKD EEECCCCCHHHHCCCCC >Mature Secondary Structure MKRVVLYIKDKCPHCKDAQRYLDSKGIKYRLCNAKMERGRKELDALGARSVPVLKIGDRL CCEEEEEECCCCCCCHHHHHHHHCCCCEEEECCCHHHCCHHHHHHCCCCCCCEEEECCEE MIGWNHTNFERIYSSKD EEECCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA