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The map label for this gene is 227081765

Identifier: 227081765

GI number: 227081765

Start: 1674638

End: 1675351

Strand: Direct

Name: 227081765

Synonym: VCM66_1552

Alternate gene names: NA

Gene position: 1674638-1675351 (Clockwise)

Preceding gene: 227081764

Following gene: 227081769

Centisome position: 57.9

GC content: 45.94

Gene sequence:

>714_bases
ATGAAAAATGTGTTTGGTTTAGGGCTCATCATCGCCTTAGCAGGCTGCGTCACCGTCACTGAAACGGCGGGTAACGCAAC
GCAAAGTGACCCAACTGAGATGGCAGAGGCGCGCATTGCCCTTGGTTTAGGCTATTTAGAAAATGGCAGCATGATCAAAG
CACGGGAAAATTTAGAAAAAGCACTACAGCATGCGCCGGATTATTACCGCTCACAACTTTCAATGGCGCACTATTATGAG
GCTGTTGGTGAGAATGATTCTGCGCGGAAAATGTACCGCACGGCACTAAGCGAGCACCCGAAAAACGGTAATGTGCTGAA
TAACTTCGGTACCTTTTTGTGTAAGCAAGGCGAGTATGACACGGCCGATCAATACTTTCGCCGTGCGGTCGAGCAACCTT
ATTACTACTTAATTTCAGCCAGTTACGAGAACGCCGGATTGTGTGCTCTCAAAGCAGGGAAAACGGACAACGCTCGTGAA
TATTTCAAACGTGCTATCGATCACGATCCAAATCGTCTTCTGTCCATTTTACAGCTGACTAAAATGGAGATCGAAGCCGG
CGACTACACACCCGCTCGCTTACGTTTAATGGACTTGAATCAGCGTTATGGCTATCAAAAAGCCTCACTCAAACTACTGA
TTGAATTAGAAAAACGCGCTGGGAATTCAGCGTTAGAGCAAAAATATCAAACCCTATTAAATTCTCTCTCTTAA

Upstream 100 bases:

>100_bases
GATACATAAATAGATTTGCCAACTGACTCGCAGACTTAACTCTCACCGCTCGGCCTCCCAATTGAATTGCCTATCATTGA
GGCGTTAACGGGAGGGATGT

Downstream 100 bases:

>100_bases
GGTTTATTTGATATTGGTCGGACGACCACCGCCCTGACGATCTCGATAATGAGTGCGCCGCAATCGGCGCACTTTTTGTG
CGCGCTGAATTTTTAAGTAT

Product: putative fimbrial biogenesis and twitching motility protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKNVFGLGLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYE
AVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNARE
YFKRAIDHDPNRLLSILQLTKMEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLLNSLS

Sequences:

>Translated_237_residues
MKNVFGLGLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYE
AVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNARE
YFKRAIDHDPNRLLSILQLTKMEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLLNSLS
>Mature_237_residues
MKNVFGLGLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEKALQHAPDYYRSQLSMAHYYE
AVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYDTADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNARE
YFKRAIDHDPNRLLSILQLTKMEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLLNSLS

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013360
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26650; Mature: 26650

Theoretical pI: Translated: 7.49; Mature: 7.49

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVFGLGLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEK
CCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
ALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYD
HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
TADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLT
CHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHH
KMEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLLNSLS
HHHHCCCCCCHHHEEEEECHHHHCCCHHHHHHHEEEHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNVFGLGLIIALAGCVTVTETAGNATQSDPTEMAEARIALGLGYLENGSMIKARENLEK
CCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEHHHHHHHH
ALQHAPDYYRSQLSMAHYYEAVGENDSARKMYRTALSEHPKNGNVLNNFGTFLCKQGEYD
HHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCC
TADQYFRRAVEQPYYYLISASYENAGLCALKAGKTDNAREYFKRAIDHDPNRLLSILQLT
CHHHHHHHHHCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHH
KMEIEAGDYTPARLRLMDLNQRYGYQKASLKLLIELEKRAGNSALEQKYQTLLNSLS
HHHHCCCCCCHHHEEEEECHHHHCCCHHHHHHHEEEHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]