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The map label for this gene is 227081763

Identifier: 227081763

GI number: 227081763

Start: 1672973

End: 1673422

Strand: Reverse

Name: 227081763

Synonym: VCM66_1550

Alternate gene names: NA

Gene position: 1673422-1672973 (Counterclockwise)

Preceding gene: 227081766

Following gene: 227081758

Centisome position: 57.85

GC content: 47.33

Gene sequence:

>450_bases
TTGTCGATAGCAAAATGCAACGAACCTCAATCTAAGTTAGTATCTCTCGGCACAATTGACTACTGTGAATCAAGTATGCG
ACCTCATTTAACCCTTATTCGCGGTTTGCCAGGTTCGGGGAAATCAACCTTGGCGAAGACCTTGTCTGCTGTACATCTGG
AAGCAGACATGTATTTTGTTAATCCACAAGGTGAGTACCATTTTCGCCCCGAATACTTGGCGCAAGCCCATGAATGGTGC
CAACAACAGACGGAATACTGGCTGCAACAAGGCAAAGACGTGGTGGTATCGAATACTTTTGTTCGGCATTGGGAGATGGC
GGTATACCGAAAACTTGCCCGACAATATCGAGCTAAGCTAACGATTCTGGTGTGCCGAGAACGTTATCAAAACGTGCATG
GGGTGGATGAAGCCACTGTCGAACGCATGCGTCAACAGTGGCAAGAGTAG

Upstream 100 bases:

>100_bases
CTCGCCGGTAATTGGTCGGGGATTCTAATCGGCACAGCTTTCTCCCTAAGCATTAATTTGGACGTCTAAACATCCAGACT
TATAACTCAACCGAAAATTA

Downstream 100 bases:

>100_bases
ACATTATTGTGGGGGTTTAGCGGTACGCTGGCGAACTCGGCGTAAAAGATAAAACGCCAAACCGCCCCATACCAAAGCCT
GTGCCCAAAGGAGTGTCCAT

Product: NEDD4-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSIAKCNEPQSKLVSLGTIDYCESSMRPHLTLIRGLPGSGKSTLAKTLSAVHLEADMYFVNPQGEYHFRPEYLAQAHEWC
QQQTEYWLQQGKDVVVSNTFVRHWEMAVYRKLARQYRAKLTILVCRERYQNVHGVDEATVERMRQQWQE

Sequences:

>Translated_149_residues
MSIAKCNEPQSKLVSLGTIDYCESSMRPHLTLIRGLPGSGKSTLAKTLSAVHLEADMYFVNPQGEYHFRPEYLAQAHEWC
QQQTEYWLQQGKDVVVSNTFVRHWEMAVYRKLARQYRAKLTILVCRERYQNVHGVDEATVERMRQQWQE
>Mature_148_residues
SIAKCNEPQSKLVSLGTIDYCESSMRPHLTLIRGLPGSGKSTLAKTLSAVHLEADMYFVNPQGEYHFRPEYLAQAHEWCQ
QQTEYWLQQGKDVVVSNTFVRHWEMAVYRKLARQYRAKLTILVCRERYQNVHGVDEATVERMRQQWQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI119226224, Length=139, Percent_Identity=32.3741007194245, Blast_Score=85, Evalue=2e-17,
Organism=Homo sapiens, GI119226227, Length=114, Percent_Identity=35.9649122807018, Blast_Score=78, Evalue=2e-15,
Organism=Homo sapiens, GI31742492, Length=130, Percent_Identity=33.8461538461538, Blast_Score=67, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17450; Mature: 17319

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAKCNEPQSKLVSLGTIDYCESSMRPHLTLIRGLPGSGKSTLAKTLSAVHLEADMYFV
CCCCCCCCCHHHHHHCCCHHHHHHCCCCCCHHEECCCCCCHHHHHHHHHHHHEECEEEEE
NPQGEYHFRPEYLAQAHEWCQQQTEYWLQQGKDVVVSNTFVRHWEMAVYRKLARQYRAKL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
TILVCRERYQNVHGVDEATVERMRQQWQE
HHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SIAKCNEPQSKLVSLGTIDYCESSMRPHLTLIRGLPGSGKSTLAKTLSAVHLEADMYFV
CCCCCCCCHHHHHHCCCHHHHHHCCCCCCHHEECCCCCCHHHHHHHHHHHHEECEEEEE
NPQGEYHFRPEYLAQAHEWCQQQTEYWLQQGKDVVVSNTFVRHWEMAVYRKLARQYRAKL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
TILVCRERYQNVHGVDEATVERMRQQWQE
HHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA