| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081766
Identifier: 227081766
GI number: 227081766
Start: 1675355
End: 1675579
Strand: Reverse
Name: 227081766
Synonym: VCM66_1553
Alternate gene names: NA
Gene position: 1675579-1675355 (Counterclockwise)
Preceding gene: 227081767
Following gene: 227081763
Centisome position: 57.93
GC content: 44.0
Gene sequence:
>225_bases ATGAGAATTGAAGACGTTCCACTCTACGCACCCTGCCAGCCTCATTGGCTGTGCGTTCCTTTTATGGGTATTTTTGCGTT ATTACTCTTGATTGGATTGGTTTTTTTTATTCGCATTATTTATCGCGAATACTTAAAAATTCAGCGCGCACAAAAAGTGC GCCGATTGCGGCGCACTCATTATCGAGATCGTCAGGGCGGTGGTCGTCCGACCAATATCAAATAA
Upstream 100 bases:
>100_bases ACTTACTTGCCGCCTACCTGCAACTCCAAGTCGTTTGGGTATACTGAACATGAAAAGTAAAAAGCCAATCGCTCCTAAAT AAAAATCCAGGAGGGGCAAG
Downstream 100 bases:
>100_bases ACCTTAAGAGAGAGAATTTAATAGGGTTTGATATTTTTGCTCTAACGCTGAATTCCCAGCGCGTTTTTCTAATTCAATCA GTAGTTTGAGTGAGGCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 74; Mature: 74
Protein sequence:
>74_residues MRIEDVPLYAPCQPHWLCVPFMGIFALLLLIGLVFFIRIIYREYLKIQRAQKVRRLRRTHYRDRQGGGRPTNIK
Sequences:
>Translated_74_residues MRIEDVPLYAPCQPHWLCVPFMGIFALLLLIGLVFFIRIIYREYLKIQRAQKVRRLRRTHYRDRQGGGRPTNIK >Mature_74_residues MRIEDVPLYAPCQPHWLCVPFMGIFALLLLIGLVFFIRIIYREYLKIQRAQKVRRLRRTHYRDRQGGGRPTNIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8913; Mature: 8913
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIEDVPLYAPCQPHWLCVPFMGIFALLLLIGLVFFIRIIYREYLKIQRAQKVRRLRRTH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRDRQGGGRPTNIK HHCCCCCCCCCCCC >Mature Secondary Structure MRIEDVPLYAPCQPHWLCVPFMGIFALLLLIGLVFFIRIIYREYLKIQRAQKVRRLRRTH CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YRDRQGGGRPTNIK HHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA