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The map label for this gene is proQ

Identifier: 227081656

GI number: 227081656

Start: 1556328

End: 1556954

Strand: Reverse

Name: proQ

Synonym: VCM66_1440

Alternate gene names: 227081656

Gene position: 1556954-1556328 (Counterclockwise)

Preceding gene: 227081657

Following gene: 227081655

Centisome position: 53.83

GC content: 46.89

Gene sequence:

>627_bases
ATGGAAAACACTGAAAAGTTAAAAAACAGCAAAGAAGTGATCGCGTACATTGCTGAATGTTTCCCTAACTGCTTTACTTT
AGAAGGTGAAGCAAAGCCTCTGAAAATTGGTATTTTTCAGGATCTTGCTGATCGCTTGAATGACGACCCTAAAGTAAGCA
AAACTCAGCTTCGTGCCGCGTTAAGACAATACACCTCTTCTTGGCGTTATTTACATGGTGTAAAACCTGGCGCAACTCGT
GTTGATTTGGACGGAAACCCTTGTGGTGAGCTGGAAGAACAGCACGTAGAACACGCACAAGCGGCACTGGCGGAGAGCAA
AGCTCGCGTAGAAGCTCGTCGTAAAGAACAAGTAAAGAAAGTGCGTGAAGAAGCGAAAGCGAACAAGCCAAAGGCGAAAA
AGCCACAGCAAGCTCGCCGTCCGCAAAACGCACCGAAAGTGGAGAAAAAGCCTGTAGAAACTCGCGCACTGGCTGCGTCT
GAGCTTAACGTTGGCAATCAAGTCAATGTGAATATGGGTAAAGGCAACATGGCTGCGACCATCGTTGAAGTCAATAAGGA
AGATGTGCGTGTTCAACTTGCCAACGGCCTACAAATGGTTGTGAAAGCGGAGCACTTGCGCGCATAA

Upstream 100 bases:

>100_bases
ATTGCCCTTTGCCTGTGGTTTTTCCTTTGCAGGTCTTTATAATACCGCACATATTTACACATCAATGTTTGGCGGGCAGC
CGCAATAACCAGGAATCCTC

Downstream 100 bases:

>100_bases
AGGAGATACTCCTACGCATGAAATGCCGTTCAAAAATATCTCTGATTGCTGCTAGCCTATGGCTGGCAGCCTTTTCAGCT
CAGGCTCTAGAAGCCAAACT

Product: putative solute/DNA competence effector

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MENTEKLKNSKEVIAYIAECFPNCFTLEGEAKPLKIGIFQDLADRLNDDPKVSKTQLRAALRQYTSSWRYLHGVKPGATR
VDLDGNPCGELEEQHVEHAQAALAESKARVEARRKEQVKKVREEAKANKPKAKKPQQARRPQNAPKVEKKPVETRALAAS
ELNVGNQVNVNMGKGNMAATIVEVNKEDVRVQLANGLQMVVKAEHLRA

Sequences:

>Translated_208_residues
MENTEKLKNSKEVIAYIAECFPNCFTLEGEAKPLKIGIFQDLADRLNDDPKVSKTQLRAALRQYTSSWRYLHGVKPGATR
VDLDGNPCGELEEQHVEHAQAALAESKARVEARRKEQVKKVREEAKANKPKAKKPQQARRPQNAPKVEKKPVETRALAAS
ELNVGNQVNVNMGKGNMAATIVEVNKEDVRVQLANGLQMVVKAEHLRA
>Mature_208_residues
MENTEKLKNSKEVIAYIAECFPNCFTLEGEAKPLKIGIFQDLADRLNDDPKVSKTQLRAALRQYTSSWRYLHGVKPGATR
VDLDGNPCGELEEQHVEHAQAALAESKARVEARRKEQVKKVREEAKANKPKAKKPQQARRPQNAPKVEKKPVETRALAAS
ELNVGNQVNVNMGKGNMAATIVEVNKEDVRVQLANGLQMVVKAEHLRA

Specific function: Not Exactly Known; May Be A Structural Element That Influences The Osmotic Activation Of Prop At A Posttranslational Level. [C]

COG id: COG3109

COG function: function code T; Activator of osmoprotectant transporter ProP

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the proQ family

Homologues:

Organism=Escherichia coli, GI48994892, Length=230, Percent_Identity=53.0434782608696, Blast_Score=234, Evalue=4e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PROQ_VIBC3 (A5F827)

Other databases:

- EMBL:   CP000627
- EMBL:   CP001235
- ProteinModelPortal:   A5F827
- SMR:   A5F827
- STRING:   A5F827
- GenomeReviews:   CP000627_GR
- GenomeReviews:   CP001235_GR
- KEGG:   vco:VC0395_A1105
- eggNOG:   COG3109
- HOGENOM:   HBG495470
- OMA:   RFPQCFS
- ProtClustDB:   PRK04950
- BioCyc:   VCHO345073:VC0395_A1105-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00749
- InterPro:   IPR016103
- Gene3D:   G3DSA:1.10.1710.10
- SMART:   SM00945

Pfam domain/function: PF04352 ProQ; SSF48657 FINO

EC number: NA

Molecular weight: Translated: 23185; Mature: 23185

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENTEKLKNSKEVIAYIAECFPNCFTLEGEAKPLKIGIFQDLADRLNDDPKVSKTQLRAA
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHH
LRQYTSSWRYLHGVKPGATRVDLDGNPCGELEEQHVEHAQAALAESKARVEARRKEQVKK
HHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREEAKANKPKAKKPQQARRPQNAPKVEKKPVETRALAASELNVGNQVNVNMGKGNMAAT
HHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEE
IVEVNKEDVRVQLANGLQMVVKAEHLRA
EEEECHHHHEEHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MENTEKLKNSKEVIAYIAECFPNCFTLEGEAKPLKIGIFQDLADRLNDDPKVSKTQLRAA
CCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHH
LRQYTSSWRYLHGVKPGATRVDLDGNPCGELEEQHVEHAQAALAESKARVEARRKEQVKK
HHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VREEAKANKPKAKKPQQARRPQNAPKVEKKPVETRALAASELNVGNQVNVNMGKGNMAAT
HHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCEEEE
IVEVNKEDVRVQLANGLQMVVKAEHLRA
EEEECHHHHEEHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA