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The map label for this gene is uspE [H]

Identifier: 227081605

GI number: 227081605

Start: 1488082

End: 1489029

Strand: Reverse

Name: uspE [H]

Synonym: VCM66_1389

Alternate gene names: 227081605

Gene position: 1489029-1488082 (Counterclockwise)

Preceding gene: 227081606

Following gene: 227081604

Centisome position: 51.48

GC content: 46.52

Gene sequence:

>948_bases
ATGAGCATTTATAGTAAAATTCTTGTCGTGGCTGATATCAACCATGATGAACAACCTGCTTTGGCTCGGGCAATGCAACT
GGCACAAAAAAGCACCTCCGTCAGCCATATCACTTTCTTCCTATCGATTTACGATTTTTCTTATGACATGACCTCCATGC
TTTCTCTCGAAGAGCGTGATGCCATGCGCAAGGGAGTGATCCATCAACGAGAACAGTGGATGCGCTCTATTGCAGAGCCT
TATCTAGATAAATCCGTTCAGTTTGACATTAAGGTGGTGTGGCACAACCGTCCTTACGAAGCGATTATTGGTGAAATTTT
TGCGGGTGAACACGATATCCTGATCAAAGCGACTCGCAAACACGACATGCTAGAGTCCGTTATTTTCACTCCAACCGATT
GGCACTTGATGCGTAAGTGTCCGACACCGGTCTTGTTAGTCAAAAATGCTGACTGGCCAGAAAATGCCAATATCATTGCC
TCTGTGCATGTTGGCTCTGAGCTAGATACCCATATTGATTTGAATGATCGTATGGTCGAACAGCTCCTTAATTTGAGCAA
ACGCTTAGGAGCGAGTCCTTATCTTGTCAACGCTTATCCAGTCACTCCAGCCAACATCACTATTGAGCTGCCGGAGTTTG
ATCCAACCACCTATACCGATGCGGTTCGAGGACATCACCTTACGGCGATGAAGGCTCTTCGCCAAAAACATGGTTTAAGT
GAAGAGCAAACGCTTGTCCAACAAGGATTGCCCGAAGATGTGATCCCAGAAGCGGCCAAACAGCTTAATGCAGCCATGGT
GATTCTGGGCACAACAGGTAGAACGGGACTTTCGGCGGTATTTATCGGCAACACTGCAGAACATGTCATCGATAAAATTA
ACTGTGATGTGCTTGCCCTCAAACCCAATGGCTACGTAAGCCCCCTCGATCCACAGACAGCCATTTAG

Upstream 100 bases:

>100_bases
ATCATATTTCTTCCAAATACCTCTTCTTTTTACTAAAACTCTGCTCATAACTAAGCTAAAGTGAAGCTAACAAACCTCCT
CACTGAACAAGGAGTTTCTC

Downstream 100 bases:

>100_bases
TTCTCCTCAGCAGTCCCTGCCGTATGGCAGGGATTTTTTATCTCTTCACACTATAGATCTGGCATCTCTGCTATTTATCC
GTATCATACGCACTTCATTT

Product: universal stress protein UspE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERDAMRKGVIHQREQWMRSIAEP
YLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRKHDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIA
SVHVGSELDTHIDLNDRMVEQLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLS
EEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLALKPNGYVSPLDPQTAI

Sequences:

>Translated_315_residues
MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERDAMRKGVIHQREQWMRSIAEP
YLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRKHDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIA
SVHVGSELDTHIDLNDRMVEQLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLS
EEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLALKPNGYVSPLDPQTAI
>Mature_314_residues
SIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERDAMRKGVIHQREQWMRSIAEPY
LDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRKHDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIAS
VHVGSELDTHIDLNDRMVEQLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLSE
EQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLALKPNGYVSPLDPQTAI

Specific function: Required for resistance to DNA-damaging agents [H]

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

Organism=Escherichia coli, GI1787594, Length=311, Percent_Identity=54.0192926045016, Blast_Score=358, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 35304; Mature: 35173

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD
CCCHHEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEEEEEHHCCCCHHHHHHHHHHH
AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECHH
HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE
HHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEECCCHHHHH
QLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLS
HHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCC
EEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLAL
HHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCEEEE
KPNGYVSPLDPQTAI
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
SIYSKILVVADINHDEQPALARAMQLAQKSTSVSHITFFLSIYDFSYDMTSMLSLEERD
CCHHEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHEEEEEEEHHCCCCHHHHHHHHHHH
AMRKGVIHQREQWMRSIAEPYLDKSVQFDIKVVWHNRPYEAIIGEIFAGEHDILIKATRK
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHCCCCEEEEEECHH
HDMLESVIFTPTDWHLMRKCPTPVLLVKNADWPENANIIASVHVGSELDTHIDLNDRMVE
HHHHHHHHCCCCCHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCEECCCHHHHH
QLLNLSKRLGASPYLVNAYPVTPANITIELPEFDPTTYTDAVRGHHLTAMKALRQKHGLS
HHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHCCC
EEQTLVQQGLPEDVIPEAAKQLNAAMVILGTTGRTGLSAVFIGNTAEHVIDKINCDVLAL
HHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCHHHHHHHCCCCEEEE
KPNGYVSPLDPQTAI
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]