Click here to switch to the map view.

The map label for this gene is 227081590

Identifier: 227081590

GI number: 227081590

Start: 1473975

End: 1474718

Strand: Direct

Name: 227081590

Synonym: VCM66_1374

Alternate gene names: NA

Gene position: 1473975-1474718 (Clockwise)

Preceding gene: 227081589

Following gene: 227081591

Centisome position: 50.96

GC content: 34.68

Gene sequence:

>744_bases
ATGAAGTTATTGAATAATCTTGCAATAAAAAAGCTAATCTCAGTTGTTGTACTATTCATTGCATTATTTTTTCTTGGGTA
TGACTATTACCAGACTTCTCAACCTAATATTTGGGGTGATGAACCTGATGAGTCCTATATTACTATATCAGGCAAAAAGC
CTATAGATGCTTATTTAGAAGTGTGGACTCATTTTTGGGTGACAGGAGATGAGTGTGAAGCTTATTCCTACGATTTATTT
GGTCAAAAAGCCCATCAAGGAGGAAAAATAAGCCAGAAGATTACGCATGATTTTGCTAAAGATGGTTCAAATTTTGAATT
TAGAATTCCTTACCAAACGTATAAGAACTCACAAAATTGTATAGTGGAATTAAGAGACTTTTCCATACAAGCTCATAATG
ATTTTGATACCGTAGGTTTTGCTCAGTTGCGATTTTCTCCAGCAGGCAGAGAATATTACAATCGAGAGGTTGATCTAAAC
TCATTGATTACAGCAGATAATTGCAATAGTGATATATTTAAAAGTATAAGAAAAGAGTGGGCAGGAGCCATTGGTTGTCA
TTTTTATGTCGATGGAAAGAAAAAGACTAAAGATGAAGAATTCAACGCTTACACCATCTACTACGATTTTTCGAAATTCA
ATAATGACACCGTGATTCATTACGATATTTTAGCCGGTGAAAACTATCGGTCAGAGCCTTTGTCCTCAGCTCAAAAGACA
GCAGTGGTATCTGATGATAATTAA

Upstream 100 bases:

>100_bases
GTGAGCTAAGGCAGATAGTCTCTGATCCTCAGCGTATGCCTGCAACTAAATTTTTAATTTCACAGCAAACCTTACCAGAT
GAAATCAAGGTGCAAATAAG

Downstream 100 bases:

>100_bases
TGCCGGTGGTTCTGTAATTTTTAATTATGAGTTTAATAATTTCAATTAAGCTCATAATTGTCATTGTTTTAAAATCCTGT
TACGAGATAAAACACTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKLLNNLAIKKLISVVVLFIALFFLGYDYYQTSQPNIWGDEPDESYITISGKKPIDAYLEVWTHFWVTGDECEAYSYDLF
GQKAHQGGKISQKITHDFAKDGSNFEFRIPYQTYKNSQNCIVELRDFSIQAHNDFDTVGFAQLRFSPAGREYYNREVDLN
SLITADNCNSDIFKSIRKEWAGAIGCHFYVDGKKKTKDEEFNAYTIYYDFSKFNNDTVIHYDILAGENYRSEPLSSAQKT
AVVSDDN

Sequences:

>Translated_247_residues
MKLLNNLAIKKLISVVVLFIALFFLGYDYYQTSQPNIWGDEPDESYITISGKKPIDAYLEVWTHFWVTGDECEAYSYDLF
GQKAHQGGKISQKITHDFAKDGSNFEFRIPYQTYKNSQNCIVELRDFSIQAHNDFDTVGFAQLRFSPAGREYYNREVDLN
SLITADNCNSDIFKSIRKEWAGAIGCHFYVDGKKKTKDEEFNAYTIYYDFSKFNNDTVIHYDILAGENYRSEPLSSAQKT
AVVSDDN
>Mature_247_residues
MKLLNNLAIKKLISVVVLFIALFFLGYDYYQTSQPNIWGDEPDESYITISGKKPIDAYLEVWTHFWVTGDECEAYSYDLF
GQKAHQGGKISQKITHDFAKDGSNFEFRIPYQTYKNSQNCIVELRDFSIQAHNDFDTVGFAQLRFSPAGREYYNREVDLN
SLITADNCNSDIFKSIRKEWAGAIGCHFYVDGKKKTKDEEFNAYTIYYDFSKFNNDTVIHYDILAGENYRSEPLSSAQKT
AVVSDDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28474; Mature: 28474

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLNNLAIKKLISVVVLFIALFFLGYDYYQTSQPNIWGDEPDESYITISGKKPIDAYLE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHH
VWTHFWVTGDECEAYSYDLFGQKAHQGGKISQKITHDFAKDGSNFEFRIPYQTYKNSQNC
HHHHHEEECCCCCEEEECCCCCHHCCCCCHHHHHHHHHHCCCCCEEEECCHHHHCCCCCE
IVELRDFSIQAHNDFDTVGFAQLRFSPAGREYYNREVDLNSLITADNCNSDIFKSIRKEW
EEEEEEEEEEECCCCCCCCEEEEEECCCCHHHCCCCCCHHHEEECCCCCHHHHHHHHHHH
AGAIGCHFYVDGKKKTKDEEFNAYTIYYDFSKFNNDTVIHYDILAGENYRSEPLSSAQKT
CCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHE
AVVSDDN
EEEECCC
>Mature Secondary Structure
MKLLNNLAIKKLISVVVLFIALFFLGYDYYQTSQPNIWGDEPDESYITISGKKPIDAYLE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHH
VWTHFWVTGDECEAYSYDLFGQKAHQGGKISQKITHDFAKDGSNFEFRIPYQTYKNSQNC
HHHHHEEECCCCCEEEECCCCCHHCCCCCHHHHHHHHHHCCCCCEEEECCHHHHCCCCCE
IVELRDFSIQAHNDFDTVGFAQLRFSPAGREYYNREVDLNSLITADNCNSDIFKSIRKEW
EEEEEEEEEEECCCCCCCCEEEEEECCCCHHHCCCCCCHHHEEECCCCCHHHHHHHHHHH
AGAIGCHFYVDGKKKTKDEEFNAYTIYYDFSKFNNDTVIHYDILAGENYRSEPLSSAQKT
CCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCHHHE
AVVSDDN
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA