| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081591
Identifier: 227081591
GI number: 227081591
Start: 1474863
End: 1475600
Strand: Direct
Name: 227081591
Synonym: VCM66_1375
Alternate gene names: NA
Gene position: 1474863-1475600 (Clockwise)
Preceding gene: 227081590
Following gene: 227081592
Centisome position: 50.99
GC content: 41.06
Gene sequence:
>738_bases ATGAAAAAATTGATTTTCTTGTTGTCGGCACTTCTACTCAACTCTTGTTCCACCAATCCCGTATATGAAACAGAGCAACC ATGGACTTGGCGAGTTGGTGTAACAATGCCCTCTTTTTATCCAGTCAACGTTACTCGAGTCTATGGCGTGAATAATAAAG AGGATTGGACAGTCTTAATTCACAACTTTATGACATTTGTGAGTGATAGCGATGTTGAGTATATCCGTCAGATATTTCCT GATTATGATGGTTTTGGGCTGCCACATGCATTAGGTATTACAAGCAGAAACCAAATTGGTACCGGAACCAATCACTTGCC TGATACACTCTATGTATGTTGGGTTTCTTTATTCGACACTAAGTTTTATGTCACTAAATATGATATTCCTGACAACGTAA AACAGTTGAGTGCGACAGAGGTCGGTTATACTCGAAGCGATGGTGAGTTCTTTGAATCTTGTTATCGTACTCGATTTGTC TTTGGTTTACTGCCTAATGGGCAAGCTAAGGTGTGGTTGAGTGGCTGTGGTGAGACTATTTATTTGACCGAGCTAGCACC TGACCAAATACTTGACCGCGACAGTAATGGCGTTAAATTTGATTCTTATCGGAAGTCTTCCTCTTTTGTTGATGTTCAGC AACGCGCTAAGGATGCAGGTGTTGAGCTAGAGCCCATCCCTTGGGATAAAGTGAATAAAGTCTACTCGAGATATGAGATT AAAACGCTTGGCGAGTAA
Upstream 100 bases:
>100_bases ATTAAGCTCATAATTGTCATTGTTTTAAAATCCTGTTACGAGATAAAACACTTCTATTTGGTGAATCGTAGTTAGCTGAT AATACAATCAAGGAAGTAAA
Downstream 100 bases:
>100_bases CTTAGCGTGAATTGAAAAATCTTCATAAGACACATGAGAGGCTTTGCGGTATAAGAAAGGCTTGCTGATTTTCCTTCAAG GATTGATATGGTTATCCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKLIFLLSALLLNSCSTNPVYETEQPWTWRVGVTMPSFYPVNVTRVYGVNNKEDWTVLIHNFMTFVSDSDVEYIRQIFP DYDGFGLPHALGITSRNQIGTGTNHLPDTLYVCWVSLFDTKFYVTKYDIPDNVKQLSATEVGYTRSDGEFFESCYRTRFV FGLLPNGQAKVWLSGCGETIYLTELAPDQILDRDSNGVKFDSYRKSSSFVDVQQRAKDAGVELEPIPWDKVNKVYSRYEI KTLGE
Sequences:
>Translated_245_residues MKKLIFLLSALLLNSCSTNPVYETEQPWTWRVGVTMPSFYPVNVTRVYGVNNKEDWTVLIHNFMTFVSDSDVEYIRQIFP DYDGFGLPHALGITSRNQIGTGTNHLPDTLYVCWVSLFDTKFYVTKYDIPDNVKQLSATEVGYTRSDGEFFESCYRTRFV FGLLPNGQAKVWLSGCGETIYLTELAPDQILDRDSNGVKFDSYRKSSSFVDVQQRAKDAGVELEPIPWDKVNKVYSRYEI KTLGE >Mature_245_residues MKKLIFLLSALLLNSCSTNPVYETEQPWTWRVGVTMPSFYPVNVTRVYGVNNKEDWTVLIHNFMTFVSDSDVEYIRQIFP DYDGFGLPHALGITSRNQIGTGTNHLPDTLYVCWVSLFDTKFYVTKYDIPDNVKQLSATEVGYTRSDGEFFESCYRTRFV FGLLPNGQAKVWLSGCGETIYLTELAPDQILDRDSNGVKFDSYRKSSSFVDVQQRAKDAGVELEPIPWDKVNKVYSRYEI KTLGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28077; Mature: 28077
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIFLLSALLLNSCSTNPVYETEQPWTWRVGVTMPSFYPVNVTRVYGVNNKEDWTVLI CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEECEEEEEEEECCCCCCHHHHH HNFMTFVSDSDVEYIRQIFPDYDGFGLPHALGITSRNQIGTGTNHLPDTLYVCWVSLFDT HHHHHHHCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC KFYVTKYDIPDNVKQLSATEVGYTRSDGEFFESCYRTRFVFGLLPNGQAKVWLSGCGETI EEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEE YLTELAPDQILDRDSNGVKFDSYRKSSSFVDVQQRAKDAGVELEPIPWDKVNKVYSRYEI EEEECCCHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHEEE KTLGE EECCC >Mature Secondary Structure MKKLIFLLSALLLNSCSTNPVYETEQPWTWRVGVTMPSFYPVNVTRVYGVNNKEDWTVLI CHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEECEEEEEEEECCCCCCHHHHH HNFMTFVSDSDVEYIRQIFPDYDGFGLPHALGITSRNQIGTGTNHLPDTLYVCWVSLFDT HHHHHHHCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHCC KFYVTKYDIPDNVKQLSATEVGYTRSDGEFFESCYRTRFVFGLLPNGQAKVWLSGCGETI EEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHEEEEECCCCCEEEEEECCCCEE YLTELAPDQILDRDSNGVKFDSYRKSSSFVDVQQRAKDAGVELEPIPWDKVNKVYSRYEI EEEECCCHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHHHHEEE KTLGE EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA