| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is rhlE-1 [H]
Identifier: 227081578
GI number: 227081578
Start: 1457108
End: 1458301
Strand: Direct
Name: rhlE-1 [H]
Synonym: VCM66_1362
Alternate gene names: 227081578
Gene position: 1457108-1458301 (Clockwise)
Preceding gene: 227081577
Following gene: 227081580
Centisome position: 50.37
GC content: 48.99
Gene sequence:
>1194_bases ATGTCTTTTTCTCAACTTGGATTAAGTGACGTTCTGGTACAAACCGTAGCGCAACTTGGTTACCAAAAACCGACCCATAT TCAAACCCAAGCGATTCCAGTGATTTTGCAGGGACGTGATCTGATTGCCGCTGCGCAAACGGGCACGGGTAAAACCGCCA GTTTCGTCCTGCCTATTTTGGAAAAACTGCGCCAAGGGCAAACGCAACGTAAAAAACGTGTCCGCGCCTTGATTTTAGTG CCAACCCGCGAGCTTGCGATGCAAGTGGCGGAAAAAGTAGAGCAATACGGTAAAGACACGGGCTTAAAGAGCCTTGCTGT GTTTGGTGGCGTCGATGAACAAGCACAGAAGCAGCGCTTGATTGATGGCGTGGATGTGCTGGTGGCCACACCGGGGCGTT TGATGGATCTCTATGGGCAACGCGCCGTCTATTTCGAAGAGATAGAAATGGTGGTACTCGACGAAGCCGACCGCATGCTG GATATGGGTTTTATTGAGTCGATCAACAAAATCATTGACTGCCTGCCGAGTGAAGTACAGTTTCTGCTTTTTTCCGCGAC ACTGTCACGTAAAGTGCGTGAGTTAGCGAAAACCGCAGTACGCGATCCGCATGAAATCAGTATCGCCGCCAACCAAGCCT CAAAAAGCAATATTAGCCAATGGCTGATCACCGTCGATAAAGACACCAAATCCGCATTGTTGAGCCATTTAATCAATGAG CAGCAGTGGGATCAGGCATTGATTTTTATTGAAACCAAACATGGTGCAGCCAAGCTCGTTTCTCAACTTGAAAAGCGGGG CATCCATGCGGAAGCGTTTCATAGTGGCCGTAGCCAAGCCATTCGCGCCCAACTGCTTGAAGATTTTAAGTCAGGAAAAA TCAAATACTTGGTCGCAACAGGTGTCGCAGCACGCGGCATTGATATTGACCAGCTATCGCGTGTAGTGAACTACGATTTG CCCTTCCCAGCCGATGAATATGTCCACCGAATCGGTCGAACAGGGCGCGCAGAGGCTGTCGGCGAAGCCATTTCGTTTGT CTCAAAAGACAACTTCAAAAATCTGTGCATGATTGAAAGCCGCTTAGGCCATTTGATTGAGCGTCGCGTGGTAGAAGGCT TTGAGCCGAAAAAGCCCGTACCGATTTCGATTTTGAACTATGTGCCCAAACATAAGCGTGCGGTGCAAGATTAA
Upstream 100 bases:
>100_bases AAGAAAAAACACAGCGGTTGCTTAGGTTAGTGTTAGAATCTGACCCTTCTATATTTAGGCTAGACCTCTGTTAGGTCTGG CAGTAAGCTCGAGTAAATTC
Downstream 100 bases:
>100_bases TACGAACACTTCAGAAAAAGCCGGGAATTTCCCGGCTTTTTCTATTCTATTTTTCAGTTCAATCAGCTGCGTACAGGCAT AAAAAGGCCTCTACCGCGCG
Product: ATP-dependent RNA helicase RhlE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRALILV PTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRML DMGFIESINKIIDCLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRVVNYDL PFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLGHLIERRVVEGFEPKKPVPISILNYVPKHKRAVQD
Sequences:
>Translated_397_residues MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRALILV PTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRML DMGFIESINKIIDCLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRVVNYDL PFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLGHLIERRVVEGFEPKKPVPISILNYVPKHKRAVQD >Mature_396_residues SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKLRQGQTQRKKRVRALILVP TRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLD MGFIESINKIIDCLPSEVQFLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQ QWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVATGVAARGIDIDQLSRVVNYDLP FPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIESRLGHLIERRVVEGFEPKKPVPISILNYVPKHKRAVQD
Specific function: Acts as an ATP-dependent RNA helicase, able to unwind ds-RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI20149629, Length=374, Percent_Identity=36.8983957219251, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI301171475, Length=409, Percent_Identity=37.4083129584352, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI262118318, Length=357, Percent_Identity=38.375350140056, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI87196351, Length=409, Percent_Identity=37.4083129584352, Blast_Score=247, Evalue=1e-65, Organism=Homo sapiens, GI301171467, Length=409, Percent_Identity=37.4083129584352, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI216548263, Length=357, Percent_Identity=38.375350140056, Blast_Score=246, Evalue=4e-65, Organism=Homo sapiens, GI262231852, Length=357, Percent_Identity=38.375350140056, Blast_Score=245, Evalue=4e-65, Organism=Homo sapiens, GI13518015, Length=357, Percent_Identity=38.375350140056, Blast_Score=245, Evalue=5e-65, Organism=Homo sapiens, GI222352149, Length=367, Percent_Identity=37.874659400545, Blast_Score=243, Evalue=2e-64, Organism=Homo sapiens, GI169881239, Length=409, Percent_Identity=36.919315403423, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI13514809, Length=409, Percent_Identity=36.919315403423, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=37.4301675977654, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=37.4301675977654, Blast_Score=239, Evalue=2e-63, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=37.5706214689266, Blast_Score=239, Evalue=4e-63, Organism=Homo sapiens, GI55749865, Length=349, Percent_Identity=37.5358166189112, Blast_Score=238, Evalue=9e-63, Organism=Homo sapiens, GI164419743, Length=364, Percent_Identity=37.6373626373626, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI51094101, Length=364, Percent_Identity=37.6373626373626, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=37.4301675977654, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI164664518, Length=399, Percent_Identity=33.8345864661654, Blast_Score=236, Evalue=2e-62, Organism=Homo sapiens, GI41327771, Length=389, Percent_Identity=36.2467866323907, Blast_Score=234, Evalue=7e-62, Organism=Homo sapiens, GI224593278, Length=363, Percent_Identity=37.1900826446281, Blast_Score=233, Evalue=2e-61, Organism=Homo sapiens, GI31542656, Length=382, Percent_Identity=38.4816753926702, Blast_Score=230, Evalue=1e-60, Organism=Homo sapiens, GI41327776, Length=374, Percent_Identity=34.7593582887701, Blast_Score=225, Evalue=6e-59, Organism=Homo sapiens, GI7661920, Length=359, Percent_Identity=35.3760445682451, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI188035877, Length=362, Percent_Identity=37.0165745856354, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=36.3128491620112, Blast_Score=220, Evalue=2e-57, Organism=Homo sapiens, GI45446747, Length=356, Percent_Identity=35.6741573033708, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI45446743, Length=356, Percent_Identity=35.6741573033708, Blast_Score=218, Evalue=8e-57, Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=36.9565217391304, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=35.5978260869565, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI38569503, Length=362, Percent_Identity=34.5303867403315, Blast_Score=202, Evalue=3e-52, Organism=Homo sapiens, GI38569505, Length=362, Percent_Identity=34.5303867403315, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI13514831, Length=351, Percent_Identity=33.048433048433, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI6005743, Length=382, Percent_Identity=36.9109947643979, Blast_Score=191, Evalue=7e-49, Organism=Homo sapiens, GI8922886, Length=382, Percent_Identity=36.6492146596859, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI21040371, Length=356, Percent_Identity=31.1797752808989, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI41327779, Length=348, Percent_Identity=34.4827586206897, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI38327634, Length=350, Percent_Identity=31.7142857142857, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI4758112, Length=356, Percent_Identity=30.8988764044944, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI18375623, Length=356, Percent_Identity=30.8988764044944, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI50659095, Length=380, Percent_Identity=34.2105263157895, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI62241022, Length=365, Percent_Identity=36.7123287671233, Blast_Score=182, Evalue=4e-46, Organism=Homo sapiens, GI164419732, Length=376, Percent_Identity=33.2446808510638, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI13129006, Length=381, Percent_Identity=33.5958005249344, Blast_Score=178, Evalue=6e-45, Organism=Homo sapiens, GI17505907, Length=399, Percent_Identity=30.0751879699248, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI62241024, Length=343, Percent_Identity=37.0262390670554, Blast_Score=168, Evalue=9e-42, Organism=Homo sapiens, GI9506931, Length=383, Percent_Identity=29.242819843342, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=30.1369863013699, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=37.6744186046512, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI154759257, Length=391, Percent_Identity=27.6214833759591, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=31.0650887573964, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI256773275, Length=389, Percent_Identity=28.7917737789203, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI9966805, Length=319, Percent_Identity=29.153605015674, Blast_Score=129, Evalue=4e-30, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=52.3809523809524, Blast_Score=384, Evalue=1e-108, Organism=Escherichia coli, GI87082221, Length=359, Percent_Identity=39.5543175487465, Blast_Score=266, Evalue=2e-72, Organism=Escherichia coli, GI1790214, Length=369, Percent_Identity=39.8373983739837, Blast_Score=243, Evalue=1e-65, Organism=Escherichia coli, GI1788930, Length=364, Percent_Identity=37.0879120879121, Blast_Score=220, Evalue=1e-58, Organism=Escherichia coli, GI1787605, Length=363, Percent_Identity=36.6391184573003, Blast_Score=202, Evalue=4e-53, Organism=Escherichia coli, GI48994977, Length=379, Percent_Identity=23.7467018469657, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17555296, Length=373, Percent_Identity=37.8016085790885, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI115533224, Length=337, Percent_Identity=40.3560830860534, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=38.5245901639344, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=38.5245901639344, Blast_Score=248, Evalue=6e-66, Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=38.5245901639344, Blast_Score=247, Evalue=6e-66, Organism=Caenorhabditis elegans, GI32565321, Length=380, Percent_Identity=36.5789473684211, Blast_Score=246, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71995718, Length=371, Percent_Identity=37.1967654986523, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71987143, Length=367, Percent_Identity=35.6948228882834, Blast_Score=234, Evalue=7e-62, Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=38.0681818181818, Blast_Score=230, Evalue=1e-60, Organism=Caenorhabditis elegans, GI71995724, Length=359, Percent_Identity=36.2116991643454, Blast_Score=227, Evalue=7e-60, Organism=Caenorhabditis elegans, GI17507121, Length=359, Percent_Identity=35.933147632312, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17537549, Length=377, Percent_Identity=36.0742705570292, Blast_Score=226, Evalue=1e-59, Organism=Caenorhabditis elegans, GI17510559, Length=403, Percent_Identity=34.7394540942928, Blast_Score=216, Evalue=2e-56, Organism=Caenorhabditis elegans, GI71999646, Length=366, Percent_Identity=33.6065573770492, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI71999644, Length=366, Percent_Identity=33.6065573770492, Blast_Score=214, Evalue=9e-56, Organism=Caenorhabditis elegans, GI17552114, Length=367, Percent_Identity=32.1525885558583, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17509811, Length=354, Percent_Identity=35.0282485875706, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17507945, Length=360, Percent_Identity=36.9444444444444, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17552642, Length=385, Percent_Identity=34.2857142857143, Blast_Score=204, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17507877, Length=373, Percent_Identity=33.7801608579088, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=33.4231805929919, Blast_Score=198, Evalue=5e-51, Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=33.4231805929919, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17507879, Length=373, Percent_Identity=33.2439678284182, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=33.5135135135135, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=29.4617563739377, Blast_Score=177, Evalue=8e-45, Organism=Caenorhabditis elegans, GI17505370, Length=330, Percent_Identity=33.3333333333333, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71990816, Length=369, Percent_Identity=34.4173441734417, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI193206561, Length=377, Percent_Identity=30.5039787798408, Blast_Score=170, Evalue=2e-42, Organism=Caenorhabditis elegans, GI193208216, Length=385, Percent_Identity=31.1688311688312, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI17508543, Length=371, Percent_Identity=29.6495956873315, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17553716, Length=387, Percent_Identity=28.9405684754522, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI17536099, Length=395, Percent_Identity=31.1392405063291, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536101, Length=395, Percent_Identity=31.1392405063291, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17536103, Length=395, Percent_Identity=31.1392405063291, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI25148203, Length=419, Percent_Identity=25.0596658711217, Blast_Score=147, Evalue=8e-36, Organism=Caenorhabditis elegans, GI17507641, Length=409, Percent_Identity=28.361858190709, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17556951, Length=343, Percent_Identity=28.5714285714286, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI32564046, Length=396, Percent_Identity=28.2828282828283, Blast_Score=140, Evalue=9e-34, Organism=Caenorhabditis elegans, GI71997889, Length=384, Percent_Identity=27.0833333333333, Blast_Score=127, Evalue=7e-30, Organism=Caenorhabditis elegans, GI25148291, Length=328, Percent_Identity=27.4390243902439, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI25148205, Length=343, Percent_Identity=24.7813411078717, Blast_Score=105, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=29.8076923076923, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17557982, Length=367, Percent_Identity=25.6130790190736, Blast_Score=88, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17565430, Length=366, Percent_Identity=23.7704918032787, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI71987152, Length=95, Percent_Identity=43.1578947368421, Blast_Score=81, Evalue=9e-16, Organism=Saccharomyces cerevisiae, GI6325138, Length=367, Percent_Identity=40.8719346049046, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=40, Blast_Score=248, Evalue=1e-66, Organism=Saccharomyces cerevisiae, GI6321856, Length=373, Percent_Identity=38.0697050938338, Blast_Score=247, Evalue=2e-66, Organism=Saccharomyces cerevisiae, GI6324217, Length=355, Percent_Identity=38.0281690140845, Blast_Score=240, Evalue=2e-64, Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=35.6353591160221, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=35.1648351648352, Blast_Score=223, Evalue=6e-59, Organism=Saccharomyces cerevisiae, GI6321360, Length=357, Percent_Identity=37.8151260504202, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=35.6940509915014, Blast_Score=217, Evalue=2e-57, Organism=Saccharomyces cerevisiae, GI6324620, Length=380, Percent_Identity=35.7894736842105, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6320173, Length=420, Percent_Identity=31.6666666666667, Blast_Score=202, Evalue=7e-53, Organism=Saccharomyces cerevisiae, GI6323947, Length=358, Percent_Identity=30.1675977653631, Blast_Score=192, Evalue=9e-50, Organism=Saccharomyces cerevisiae, GI6322912, Length=350, Percent_Identity=34.8571428571429, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6322323, Length=350, Percent_Identity=34.8571428571429, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6319714, Length=376, Percent_Identity=33.7765957446808, Blast_Score=191, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=33.5958005249344, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=353, Percent_Identity=33.7110481586402, Blast_Score=187, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6320449, Length=362, Percent_Identity=33.7016574585635, Blast_Score=186, Evalue=5e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=356, Percent_Identity=31.1797752808989, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=381, Percent_Identity=29.6587926509186, Blast_Score=173, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6321267, Length=356, Percent_Identity=30.6179775280899, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=414, Percent_Identity=30.1932367149758, Blast_Score=156, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6319618, Length=402, Percent_Identity=31.3432835820896, Blast_Score=155, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6323306, Length=414, Percent_Identity=28.2608695652174, Blast_Score=153, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6324366, Length=349, Percent_Identity=26.647564469914, Blast_Score=122, Evalue=9e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=236, Percent_Identity=33.4745762711864, Blast_Score=112, Evalue=9e-26, Organism=Saccharomyces cerevisiae, GI6321374, Length=399, Percent_Identity=26.5664160401003, Blast_Score=100, Evalue=4e-22, Organism=Drosophila melanogaster, GI24584399, Length=347, Percent_Identity=41.2103746397695, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI24585582, Length=364, Percent_Identity=37.3626373626374, Blast_Score=250, Evalue=1e-66, Organism=Drosophila melanogaster, GI17985987, Length=378, Percent_Identity=38.8888888888889, Blast_Score=248, Evalue=5e-66, Organism=Drosophila melanogaster, GI24642151, Length=352, Percent_Identity=37.5, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI28574962, Length=356, Percent_Identity=36.7977528089888, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI21355075, Length=346, Percent_Identity=38.4393063583815, Blast_Score=242, Evalue=3e-64, Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=36.3128491620112, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=36.3128491620112, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=36.3128491620112, Blast_Score=242, Evalue=4e-64, Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=36.3128491620112, Blast_Score=241, Evalue=4e-64, Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=36.3128491620112, Blast_Score=241, Evalue=4e-64, Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=36.3128491620112, Blast_Score=241, Evalue=4e-64, Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=36.3128491620112, Blast_Score=241, Evalue=5e-64, Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=37.5342465753425, Blast_Score=240, Evalue=1e-63, Organism=Drosophila melanogaster, GI24584994, Length=380, Percent_Identity=35.7894736842105, Blast_Score=239, Evalue=2e-63, Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=38.2022471910112, Blast_Score=234, Evalue=6e-62, Organism=Drosophila melanogaster, GI24662330, Length=375, Percent_Identity=35.2, Blast_Score=220, Evalue=1e-57, Organism=Drosophila melanogaster, GI24645031, Length=359, Percent_Identity=35.3760445682451, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI28575014, Length=357, Percent_Identity=38.0952380952381, Blast_Score=219, Evalue=2e-57, Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=34.9162011173184, Blast_Score=219, Evalue=3e-57, Organism=Drosophila melanogaster, GI24583281, Length=379, Percent_Identity=31.3984168865435, Blast_Score=217, Evalue=1e-56, Organism=Drosophila melanogaster, GI24583279, Length=379, Percent_Identity=31.3984168865435, Blast_Score=216, Evalue=2e-56, Organism=Drosophila melanogaster, GI17136814, Length=382, Percent_Identity=37.434554973822, Blast_Score=212, Evalue=4e-55, Organism=Drosophila melanogaster, GI24582080, Length=367, Percent_Identity=35.149863760218, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24582078, Length=367, Percent_Identity=35.149863760218, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI17136248, Length=367, Percent_Identity=35.149863760218, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24582075, Length=367, Percent_Identity=35.149863760218, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=35.5769230769231, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24666101, Length=353, Percent_Identity=34.2776203966006, Blast_Score=187, Evalue=8e-48, Organism=Drosophila melanogaster, GI28571808, Length=354, Percent_Identity=30.5084745762712, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI28571809, Length=354, Percent_Identity=30.5084745762712, Blast_Score=182, Evalue=3e-46, Organism=Drosophila melanogaster, GI24581954, Length=353, Percent_Identity=30.3116147308782, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI24581952, Length=353, Percent_Identity=30.3116147308782, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI24581956, Length=353, Percent_Identity=30.3116147308782, Blast_Score=181, Evalue=5e-46, Organism=Drosophila melanogaster, GI21355559, Length=409, Percent_Identity=32.2738386308068, Blast_Score=181, Evalue=8e-46, Organism=Drosophila melanogaster, GI24642822, Length=363, Percent_Identity=31.404958677686, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24643725, Length=406, Percent_Identity=28.8177339901478, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI17647335, Length=394, Percent_Identity=28.4263959390863, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI19920478, Length=342, Percent_Identity=31.8713450292398, Blast_Score=153, Evalue=2e-37, Organism=Drosophila melanogaster, GI20130173, Length=446, Percent_Identity=25.3363228699552, Blast_Score=145, Evalue=3e-35, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=30.3680981595092, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24640164, Length=373, Percent_Identity=28.1501340482574, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI28571338, Length=229, Percent_Identity=36.2445414847162, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI18859659, Length=229, Percent_Identity=36.2445414847162, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI17136666, Length=420, Percent_Identity=25.2380952380952, Blast_Score=123, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 44203; Mature: 44072
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL CCCHHCCHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCEEEEECCCCCCHHHHHHHHH EKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL HHHHCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQ HHHHHHEEECCHHHHHHHCCCCEEHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCHHHH FLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHCH QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT HCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEE GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES CCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RLGHLIERRVVEGFEPKKPVPISILNYVPKHKRAVQD HHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHCCC >Mature Secondary Structure SFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPIL CCHHCCHHHHHHHHHHHHCCCCCCCEECCCEEEEEECCCEEEEECCCCCCHHHHHHHHH EKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDTGLKSLAVFGGVDEQAQKQRL HHHHCCHHHHHHHCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHH IDGVDVLVATPGRLMDLYGQRAVYFEEIEMVVLDEADRMLDMGFIESINKIIDCLPSEVQ HHHHHHEEECCHHHHHHHCCCCEEHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCHHHH FLLFSATLSRKVRELAKTAVRDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINE HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHEEEEECCCHHHHHHHHHHCH QQWDQALIFIETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT HCCCCEEEEEECCCCHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEE GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKDNFKNLCMIES CCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RLGHLIERRVVEGFEPKKPVPISILNYVPKHKRAVQD HHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8037924; 8905232; 9278503; 1931833; 10361280 [H]