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The map label for this gene is mcp3 [H]

Identifier: 227081565

GI number: 227081565

Start: 1442633

End: 1443868

Strand: Reverse

Name: mcp3 [H]

Synonym: VCM66_1349

Alternate gene names: 227081565

Gene position: 1443868-1442633 (Counterclockwise)

Preceding gene: 227081566

Following gene: 227081561

Centisome position: 49.92

GC content: 42.72

Gene sequence:

>1236_bases
ATGATTCGTTACCTATTTGAACGGCTAGAGAATAATAAAAAACGCTATCTTTTCTTCACTATCACTCTAAGCTGCACAGT
GCTTCTGTTGGGCTTAGAACTGGTTCGATACTGGACTCCGCAATGGTTTTATCTACCGTTTGCGATAACCGCACTTATCT
TAACGATGACCGCTTTGGTTTTCTCTCAGGGCAATCTTTTTGTGCGTTTCCTACAACAAATCCATGAACAAGAAACCATG
AAACAAAAAGAAACCGTTTCTGCCATTTGCGATTGGATCGATGAATATCGCGATCTCAATGGCTTAGTCGCGGATCATAT
TGAGAACGTAAATTCTGATGCACAAAAAGCCACTGAGGATATTCTCAATCACATTTGCTCATTGGATCACGCAGCCGCTA
ATTTTACTCACTACCTCAAAGACATGGAGTTCGATTCACAAAATATGGTATCGAGCTTAGATGAACACACCTTAGTTATC
TCAAATCTAGCCGATAGTACTCGCAGCCTGATGAGCAATATCCAAACCGAGCGCAAACAGGTTAATGATGTATTAAACCG
AGTCATGGGACTTAACGAGATCACCGAAGTCATTTCAAAAATTGCTAATGAGACCAATCTACTCGCCTTGAATGCCGCTA
TCGAAGCAGCTCGCAGTGGTGAAATGGGACGTGGCTTTGCTGTTGTCGCAGATGAAGTGCGACATCTTGCTCAGAGAGCT
GGTGAGGCAGCCTCACAAATTAGCGAAGAAATAGAAAGCCTTCGTGCAGAAGTGACTCAACGTTTTGAAGTCGCCAATAA
AGAGAGCAGCGAGCAAAACATCAAAGCTGATATGATGATTGAGTCCGTACAAAGCTTAAGACAAAGTTTCTCTTCTGTTC
GTGAATTAAGCGAACGACAAATCACCCAAATCATGTTGTACAACAATGATCTTGAGAAAAATATCAGCGGTAGTATGGCC
TGTACTCAGTTCCAAGACATCGTCCGTCAAAAGCTCGATAGCATCGAAGCTTTAATGCGTGAAAAACACTTATTGGTGGG
TGATGTCTTTAACGGTATGCGCCTCAATGATCTGCGCCATCGGGAACTAGAATACACAGAAACCCTGCGCCGCCTGTCAT
TGGAGTATAGGCACGACTTTGAAAGACACTGTAACTATCGCGATTCAGATATGAACAGCACAAAGCAATCGACGTTATCC
ACTTCAAATCCATTACCGAAAATTGAGCTGTTCTAG

Upstream 100 bases:

>100_bases
GCCAAAGGTGCAACAGGTTATTTAGTTAAGCCCGTAACGGGAGATCAATTGAAAGCCGTGATTCAACAAGTTCTCCCAGG
TAGTATTTCGTGAGGTCGTT

Downstream 100 bases:

>100_bases
CCTAACTAGCCAGAGCCGAAACTCACGGCTCTGGCTTTATACTAACTTCTGCCGTTAAGCACTCATTTTGAGTCCAGCAA
TACCCGCGATGATCAGAAAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MIRYLFERLENNKKRYLFFTITLSCTVLLLGLELVRYWTPQWFYLPFAITALILTMTALVFSQGNLFVRFLQQIHEQETM
KQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVI
SNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRA
GEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSMA
CTQFQDIVRQKLDSIEALMREKHLLVGDVFNGMRLNDLRHRELEYTETLRRLSLEYRHDFERHCNYRDSDMNSTKQSTLS
TSNPLPKIELF

Sequences:

>Translated_411_residues
MIRYLFERLENNKKRYLFFTITLSCTVLLLGLELVRYWTPQWFYLPFAITALILTMTALVFSQGNLFVRFLQQIHEQETM
KQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVI
SNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRA
GEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSMA
CTQFQDIVRQKLDSIEALMREKHLLVGDVFNGMRLNDLRHRELEYTETLRRLSLEYRHDFERHCNYRDSDMNSTKQSTLS
TSNPLPKIELF
>Mature_411_residues
MIRYLFERLENNKKRYLFFTITLSCTVLLLGLELVRYWTPQWFYLPFAITALILTMTALVFSQGNLFVRFLQQIHEQETM
KQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVI
SNLADSTRSLMSNIQTERKQVNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRA
GEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELSERQITQIMLYNNDLEKNISGSMA
CTQFQDIVRQKLDSIEALMREKHLLVGDVFNGMRLNDLRHRELEYTETLRRLSLEYRHDFERHCNYRDSDMNSTKQSTLS
TSNPLPKIELF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1789453, Length=183, Percent_Identity=29.5081967213115, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787690, Length=126, Percent_Identity=40.4761904761905, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI2367378, Length=155, Percent_Identity=36.1290322580645, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788195, Length=74, Percent_Identity=52.7027027027027, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1788194, Length=139, Percent_Identity=38.1294964028777, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 47384; Mature: 47384

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRYLFERLENNKKRYLFFTITLSCTVLLLGLELVRYWTPQWFYLPFAITALILTMTALV
CHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FSQGNLFVRFLQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATED
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
ILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRA
HHHHHHHHHCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELSERQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITQIMLYNNDLEKNISGSMACTQFQDIVRQKLDSIEALMREKHLLVGDVFNGMRLNDLRH
HHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RELEYTETLRRLSLEYRHDFERHCNYRDSDMNSTKQSTLSTSNPLPKIELF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIRYLFERLENNKKRYLFFTITLSCTVLLLGLELVRYWTPQWFYLPFAITALILTMTALV
CHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
FSQGNLFVRFLQQIHEQETMKQKETVSAICDWIDEYRDLNGLVADHIENVNSDAQKATED
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHH
ILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVISNLADSTRSLMSNIQTERKQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VNDVLNRVMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRA
HHHHHHHHHCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
GEAASQISEEIESLRAEVTQRFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELSERQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITQIMLYNNDLEKNISGSMACTQFQDIVRQKLDSIEALMREKHLLVGDVFNGMRLNDLRH
HHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RELEYTETLRRLSLEYRHDFERHCNYRDSDMNSTKQSTLSTSNPLPKIELF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]