Definition Vibrio cholerae M66-2 chromosome I, complete genome.
Accession NC_012578
Length 2,892,523

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The map label for this gene is 227081555

Identifier: 227081555

GI number: 227081555

Start: 1434420

End: 1434902

Strand: Direct

Name: 227081555

Synonym: VCM66_1339

Alternate gene names: NA

Gene position: 1434420-1434902 (Clockwise)

Preceding gene: 227081553

Following gene: 227081557

Centisome position: 49.59

GC content: 48.45

Gene sequence:

>483_bases
ATGAAAAAGACATTACTTGCTCTGGCATTACTGGGTGCCTCTTCAACCGCGATGGCGGATTCATGGATCTATGGCGGTGC
GTCAGTAGGTCAATCGGATTATGAAGGCAAACATGGTACGGCTTACTCTGTGCATGCTGGCACAGGTATTCTGCCATTCA
TTGGTTTAGAAGCGGGTTACGTGAACCACGGTGACTTTGAAATCAATGCAACTCAAGAGCTGTCAGCCTCTTCTCTTTAC
TTTGCAGTGAAACCAAGCATGGATTTCGGCCCTCTGCACGTTTACGCTAAAGGCGGCCTGCACTCATGGGATAAAGACAT
CAACGGTGGCAAAATCGATGATGGTATCGACGTGATGTACGGCATCGGTGCCGAATACTTCATCATAGGGCCATTCTCAG
TAGGCGCAAGCTACATGAACTACACCATGGATAGCACAGACGTTGGCACGCTCTCATTCAATGCGACGTTCCACTTCTTG
TAA

Upstream 100 bases:

>100_bases
TACGAAATTTGCTTAACAAGCTGAGATGACGGAATTTGCACTCAATGTGGCAACGACTGGCCGCCGTCAACGTTGCCCCA
CTATTTAAAGAAGGTTAATT

Downstream 100 bases:

>100_bases
GATTTGCTTTAATCGCAATGCTAAAGCCAGCGTCATGCTGGCTTTTTCATGTCTGCTGTTCCAAGTAATGGCATAGCGAT
GACCTGAATCTGGGAAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKKTLLALALLGASSTAMADSWIYGGASVGQSDYEGKHGTAYSVHAGTGILPFIGLEAGYVNHGDFEINATQELSASSLY
FAVKPSMDFGPLHVYAKGGLHSWDKDINGGKIDDGIDVMYGIGAEYFIIGPFSVGASYMNYTMDSTDVGTLSFNATFHFL

Sequences:

>Translated_160_residues
MKKTLLALALLGASSTAMADSWIYGGASVGQSDYEGKHGTAYSVHAGTGILPFIGLEAGYVNHGDFEINATQELSASSLY
FAVKPSMDFGPLHVYAKGGLHSWDKDINGGKIDDGIDVMYGIGAEYFIIGPFSVGASYMNYTMDSTDVGTLSFNATFHFL
>Mature_160_residues
MKKTLLALALLGASSTAMADSWIYGGASVGQSDYEGKHGTAYSVHAGTGILPFIGLEAGYVNHGDFEINATQELSASSLY
FAVKPSMDFGPLHVYAKGGLHSWDKDINGGKIDDGIDVMYGIGAEYFIIGPFSVGASYMNYTMDSTDVGTLSFNATFHFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16985; Mature: 16985

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLLALALLGASSTAMADSWIYGGASVGQSDYEGKHGTAYSVHAGTGILPFIGLEAGY
CCHHEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCC
VNHGDFEINATQELSASSLYFAVKPSMDFGPLHVYAKGGLHSWDKDINGGKIDDGIDVMY
CCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEE
GIGAEYFIIGPFSVGASYMNYTMDSTDVGTLSFNATFHFL
ECCCCEEEEECHHHCCHHHEEECCCCCCEEEEECEEEEEC
>Mature Secondary Structure
MKKTLLALALLGASSTAMADSWIYGGASVGQSDYEGKHGTAYSVHAGTGILPFIGLEAGY
CCHHEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCC
VNHGDFEINATQELSASSLYFAVKPSMDFGPLHVYAKGGLHSWDKDINGGKIDDGIDVMY
CCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEE
GIGAEYFIIGPFSVGASYMNYTMDSTDVGTLSFNATFHFL
ECCCCEEEEECHHHCCHHHEEECCCCCCEEEEECEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA