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The map label for this gene is hrpA [H]

Identifier: 227081553

GI number: 227081553

Start: 1430351

End: 1434280

Strand: Direct

Name: hrpA [H]

Synonym: VCM66_1337

Alternate gene names: 227081553

Gene position: 1430351-1434280 (Clockwise)

Preceding gene: 227081549

Following gene: 227081555

Centisome position: 49.45

GC content: 50.59

Gene sequence:

>3930_bases
TTGACTTCGTCACAGCCCACACCCGATTCGGCAGCTCAGCCAAAAGCCAATAGCGCTGCCAGTTTAAAAAAGGCGCTCGG
AGAGTGCTTGATCAAAGACCGTTTTCGTTTCAGTAAACGCATTGATGGTGCCAGTAAAATTAAAAATGAATCGGCACGCA
ACGCGGTATTTGACGAAATCGCGCTCGATATTGCGCAATCCATGATGGTGGTTGAGCAGCGTAAACAGCAGATGCCCAAA
ATCGAGTATCCTGCGCTGCTGCCAGTTAGCCAAAAACGCGATGATATTGCGCAGGCGATTGCTCATCATCAAGTGGTGAT
CGTGGCCGGTGAAACCGGTTCAGGCAAAACCACTCAGCTACCGAAAATTTGTGCAGAATTAGGCCGTGGTAAATACGGTT
TGATTGGCCACACTCAGCCGCGCCGTCTTGCTGCGCGATCAGTGGCAAACCGCATTGCCGAAGAGATGGAAACCGAACTC
GGTGGCTTTGTGGGCTATAAAGTTCGCTTTACCGATCAAATCTCGGATCAGACTCAAATCAAATTGATGACTGACGGTAT
CTTGCTGGCGGAGATCCAAAACGATCGTTTCCTCAACCAGTACGACACCATCATTATCGATGAAGCGCACGAGCGTAGCC
TCAACATCGACTTTATCTTAGGCTATCTCAAGCAGCTTTTGCCGCGTCGTCCCGATCTCAAAGTCATCATCACCTCGGCG
ACCATCGACCCTGAGCGCTTCTCGAAGCATTTTAGCAATGCGCCGATCATCGAAGTCTCAGGCCGTACTTATCCTGTGGA
AGTGCGCTATCGCCCTCTGGCGGGGGATGATGACAGCGAAAGCGATCGCGACCAACTGGAAGGCATTTTCCAAGCCGTGG
ATGAGCTGTGCGATGAAGGGCTGGGCGACATTCTGATCTTCATGAACGGTGAGCGCGAAATTCGTGATACCGCGGATGCG
CTTTCAAAGCGCAACCTGCGTGATACGGAAATTGTGCCACTGTATGCACGTTTGTCAGCCGGTGAGCAGAACAAGATTTT
CCAACCTCATGCGGGTCGTCGCATTGTGCTGGCCACCAACGTGGCGGAAACCTCGCTAACGGTTCCGGGCATCAAATACG
TTATCGACCCAGGTACCGCGCGGATCAGTCGTTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAGCCGATTTCC
CAAGCCAGCGCTAACCAGCGTAAAGGCCGCTGTGGACGTACCGAAGAGGGGATCTGTATCCGTCTCTATTCGGAAGAGGA
TTTCTTGTCACGCCCTGAGTTTACTGACCCTGAGATTCTGCGCACCAACTTAGCCTCGGTTATCTTGCAGATGACGGCAT
TGGGGCTAGGCGATATTGAAGCCTTCCCCTTTGTGGAAGCGCCAGATAAGCGCAACATTCAAGATGGTGTGCGTCTGCTC
GAAGAGCTAGGGGCTATCAACGATCAAATCAAAGACCCGAAAAAACGCCTCACTGAAAGTGGTAAGCAGCTAGCGCGTTT
GCCCATTGATCCACGTTTGGCACGCATGGTGCTCGAAGCGTCTAAATTAGGCTGTTTGAAAGAAGTGATGATTATTGCTT
CCGCGTTGTCGATTCAAGATCCGCGTGAAAGACCGAGCGACAAGCAGCAATCGGCCGATGACAAACATCGCCGCTTTAAT
CATGAAGATTCAGATTTCCTGACGTTAGTGAACTTATGGCACTACATCGGACAGCAGCAAAAAGCGTTGACCAGTAACCA
GTTCCGCCGTCAGTGCAAGCTTGATTACCTCAACTATTTGCGTGTGCGCGAATGGCAGGATGTGTACACCCAACTGCATC
AATCGACTCGGGAAATGGGTTTTAAGCTCAATGATGAGCCGGGCAGTTACCATGCGGTGCACAGTGCGATCTTGGTCGGT
TTGTTGTCGCACATCGGTATGAAAGATCAGGAGAAGAACGAGTACCACGGCGCACGTAACGCACGTTTCAACATTTTTCC
TGCCTCTGGCTTATTTAAAAAGCAGCCGAAATGGGTCATGTCGGCAGAGCTGGTGGAAACCTCCAAACTGTGGGCGCGCG
TGGTTGCGAAAATCGAACCGGATTGGATTGAGCCACTAGCGAAACACCTGAGCAAGCGCAGTTACAGTGAGCCACATTGG
TCGAAGAAAAATGCGGCGGTGATGGCGTATGAAAAAGTGATGCTGTACGGCATCCCGATTGTTCCCAAGCGCTTGGTCAA
CTATGGCACGATTGATCCTGTGCTCAGTCGCGAAATTTTCATTCGCAGCGCACTGGTAGAAGGGGATTGGGAAACCAAAC
ACGCCTTCTTCAAACAAAACCGCGCGCTACTCGCCGAAGTGGAAGAGTTAGAACACAAATCGCGTCGCCGCGATATTCTG
GTTGATGATGAAGAGTTGTTCCAATTCTACGACCAGCGTGTCGGTACCGAAGTGGTGTCTGGTCGCCATTTTGATGCGTG
GTGGAAAACCGCTAGTCGTAAAACGCCGGATCTGCTCAGCTTTGAAAAAGAGATGCTGTTCAAAGGCGATGCCAGCCACA
TTACCGATCTGGATTACCCGAATTTCTGGCATCAAGGCAATCTGAAACTCAAACTCAGTTACCAGTTTGAGCCGGGCGAG
AACAGTGACGGTGTGACGGTACACATTCCGCTGCCAATCTTAAATCAAGTTGAGCCACATGGCTTTGACTGGCAGATTCC
CGGTTTGCGCCATGAGTTGGTGGTGAGCTTAATTAAATCGCTACCGAAAACGCTGCGTAAAAACTTTGTGCCAGCCCCCA
ATTACGCTGACGCTTTTTTGGCGCGTGTAACACCGTTTGAAATGCCGCTGCTCGATGCAATGGAAAAAGAGCTGCGCCGC
ATGACGGGTGTGACGGTGCTGCGTGAAGATTGGAAACTCGATCAACTGCCTGCGCATTTAAAAATTACTTATCGCGCGGT
GGATCATCGCAATCGCAAGCTCAATGAAAGCTGCGATCTGCATGAGCTGAAAGAGAGCTTGAAAGAGAAAGTGCAAGAGA
CACTTTCACAAGTGGCCGATGACGATATCGAGCAGCGCGATCTGCATACGTGGTCGTTTGGTGAGCTACCGAAAGTGTAC
CAGCAAAAGCGTGGTGGCTTTGAAGTTAGAGCTTATCCGGCGTTAGTCGATAAGAAAGACAGCGTCGAAATCAAACTGTT
TGAAACCGAGCAAGAGCAGCTTAGCGCGATGCGTGCCGGTCAGCGCCGTTTGATTTTGCTTAACGTGCCATCACCGATCA
AATATCTGCACGCCAATCTGCCGAACAAATCTAAACTCGGTTTGTACTTTAACCCGTATGGCAAAGTGCTCGATTTGATT
GATGACTGCATTGCCTGCGGCGTTGATAAGCTGATTGAAGAGCGCGGCGGCATGGTGTGGGAGCCACAAGCATTTGAAGC
GCTCAAAGAGCATGTGCGTGCCGAGCTTGGCGATACAGTAGTTGAGATTGCCAAGCAGGTAGAAACCATTTTGACCACGG
CTTACAACATCAATAAGCGTTTGAAAGGTAAGGTGGATTTCACGATGGCGTTTGCGCTTTCTGATGTGAAAGCACAAATC
GAAGGGCTGATTTTCAGCGGCTTTGCGACTGAGTGCGGTTGGAAACGTCTGCCGGACATTCTGCGTTACATGCGCGCGAT
TGAACGCCGGATGGAAAAACTGCCGGTCGATCCCAACAAAGATCGTCTGCATATGCTGAAAATTGAATCGGTAGCCAACA
AGTATAAAGAGCTGCTGAACAAGATCCCGAAAGGGATGGCGATTCCCGATAACGTGCGAGAAATCCGCTGGATGCTCGAA
GAGTTACGCGTGAGTTATTTTGCTCAGCAATTGGGTACGCCGTATCCGGTTTCGGATAAGCGGATCATCAACGCGATTGA
GGCTTGTTAG

Upstream 100 bases:

>100_bases
GGCAGGTAAAGGTGGCTAAAGCGTGGGATCATGGGCGTGTTGCTAAAACTCTGTGGTACAATCCGCGCAGTTTTTTGGAA
AGATAACAATAGGAAATGCT

Downstream 100 bases:

>100_bases
TCATGAAGGCAAATTTCGTGGCACTCGATAATAAATAGGTACGAAATTTGCTTAACAAGCTGAGATGACGGAATTTGCAC
TCAATGTGGCAACGACTGGC

Product: ATP-dependent RNA helicase HrpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 1309; Mature: 1308

Protein sequence:

>1309_residues
MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEIALDIAQSMMVVEQRKQQMPK
IEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETEL
GGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA
TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADA
LSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPIS
QASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL
EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFN
HEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVG
LLSHIGMKDQEKNEYHGARNARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW
SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDIL
VDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLSFEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGE
NSDGVTVHIPLPILNQVEPHGFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR
MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVADDDIEQRDLHTWSFGELPKVY
QQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAGQRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLI
DDCIACGVDKLIEERGGMVWEPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI
EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLNKIPKGMAIPDNVREIRWMLE
ELRVSYFAQQLGTPYPVSDKRIINAIEAC

Sequences:

>Translated_1309_residues
MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEIALDIAQSMMVVEQRKQQMPK
IEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETEL
GGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA
TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADA
LSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPIS
QASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL
EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFN
HEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVG
LLSHIGMKDQEKNEYHGARNARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW
SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDIL
VDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLSFEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGE
NSDGVTVHIPLPILNQVEPHGFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR
MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVADDDIEQRDLHTWSFGELPKVY
QQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAGQRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLI
DDCIACGVDKLIEERGGMVWEPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI
EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLNKIPKGMAIPDNVREIRWMLE
ELRVSYFAQQLGTPYPVSDKRIINAIEAC
>Mature_1308_residues
TSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEIALDIAQSMMVVEQRKQQMPKI
EYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELG
GFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSAT
IDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADAL
SKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQ
ASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLLE
ELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSADDKHRRFNH
EDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYLRVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGL
LSHIGMKDQEKNEYHGARNARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHWS
KKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDILV
DDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLSFEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGEN
SDGVTVHIPLPILNQVEPHGFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRRM
TGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVADDDIEQRDLHTWSFGELPKVYQ
QKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAGQRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLID
DCIACGVDKLIEERGGMVWEPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQIE
GLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLNKIPKGMAIPDNVREIRWMLEE
LRVSYFAQQLGTPYPVSDKRIINAIEAC

Specific function: Not yet known [H]

COG id: COG1643

COG function: function code L; HrpA-like helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI4826690, Length=652, Percent_Identity=38.1901840490798, Blast_Score=427, Evalue=1e-119,
Organism=Homo sapiens, GI68509926, Length=648, Percent_Identity=37.3456790123457, Blast_Score=427, Evalue=1e-119,
Organism=Homo sapiens, GI256000749, Length=649, Percent_Identity=37.5963020030817, Blast_Score=410, Evalue=1e-114,
Organism=Homo sapiens, GI255982614, Length=649, Percent_Identity=37.5963020030817, Blast_Score=410, Evalue=1e-114,
Organism=Homo sapiens, GI20544129, Length=674, Percent_Identity=35.9050445103858, Blast_Score=395, Evalue=1e-109,
Organism=Homo sapiens, GI17999539, Length=660, Percent_Identity=35.9090909090909, Blast_Score=383, Evalue=1e-106,
Organism=Homo sapiens, GI20336302, Length=647, Percent_Identity=33.3848531684699, Blast_Score=366, Evalue=1e-101,
Organism=Homo sapiens, GI299829255, Length=619, Percent_Identity=36.0258481421648, Blast_Score=359, Evalue=1e-98,
Organism=Homo sapiens, GI38158022, Length=546, Percent_Identity=36.996336996337, Blast_Score=351, Evalue=3e-96,
Organism=Homo sapiens, GI261878478, Length=659, Percent_Identity=33.6874051593323, Blast_Score=348, Evalue=3e-95,
Organism=Homo sapiens, GI167830433, Length=560, Percent_Identity=32.3214285714286, Blast_Score=265, Evalue=2e-70,
Organism=Homo sapiens, GI261878481, Length=611, Percent_Identity=30.4418985270049, Blast_Score=259, Evalue=1e-68,
Organism=Homo sapiens, GI20336290, Length=539, Percent_Identity=33.0241187384045, Blast_Score=258, Evalue=2e-68,
Organism=Homo sapiens, GI20336294, Length=542, Percent_Identity=32.8413284132841, Blast_Score=257, Evalue=4e-68,
Organism=Homo sapiens, GI167830436, Length=557, Percent_Identity=31.9569120287253, Blast_Score=254, Evalue=4e-67,
Organism=Homo sapiens, GI166851804, Length=587, Percent_Identity=32.3679727427598, Blast_Score=238, Evalue=3e-62,
Organism=Homo sapiens, GI20336300, Length=647, Percent_Identity=27.3570324574961, Blast_Score=223, Evalue=1e-57,
Organism=Homo sapiens, GI100913206, Length=630, Percent_Identity=28.7301587301587, Blast_Score=216, Evalue=8e-56,
Organism=Homo sapiens, GI163914394, Length=627, Percent_Identity=25.9968102073365, Blast_Score=187, Evalue=8e-47,
Organism=Homo sapiens, GI29029601, Length=422, Percent_Identity=29.6208530805687, Blast_Score=164, Evalue=4e-40,
Organism=Homo sapiens, GI67782362, Length=193, Percent_Identity=42.4870466321244, Blast_Score=164, Evalue=5e-40,
Organism=Homo sapiens, GI269847874, Length=426, Percent_Identity=30.5164319248826, Blast_Score=155, Evalue=2e-37,
Organism=Homo sapiens, GI39777586, Length=185, Percent_Identity=40.5405405405405, Blast_Score=144, Evalue=5e-34,
Organism=Escherichia coli, GI145693127, Length=1288, Percent_Identity=71.5062111801242, Blast_Score=1931, Evalue=0.0,
Organism=Escherichia coli, GI87081693, Length=441, Percent_Identity=35.827664399093, Blast_Score=243, Evalue=5e-65,
Organism=Caenorhabditis elegans, GI17535281, Length=652, Percent_Identity=36.8098159509202, Blast_Score=404, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI25144243, Length=653, Percent_Identity=35.5283307810107, Blast_Score=403, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI32565154, Length=647, Percent_Identity=35.548686244204, Blast_Score=398, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI17554326, Length=677, Percent_Identity=37.5184638109306, Blast_Score=397, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI17531507, Length=669, Percent_Identity=36.0239162929746, Blast_Score=381, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI17556386, Length=647, Percent_Identity=35.0850077279753, Blast_Score=359, Evalue=5e-99,
Organism=Caenorhabditis elegans, GI71990212, Length=658, Percent_Identity=33.7386018237082, Blast_Score=350, Evalue=4e-96,
Organism=Caenorhabditis elegans, GI71996313, Length=515, Percent_Identity=34.7572815533981, Blast_Score=286, Evalue=4e-77,
Organism=Caenorhabditis elegans, GI17507503, Length=360, Percent_Identity=28.3333333333333, Blast_Score=150, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17552054, Length=214, Percent_Identity=37.8504672897196, Blast_Score=147, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI86562256, Length=195, Percent_Identity=37.4358974358974, Blast_Score=124, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320850, Length=659, Percent_Identity=37.7845220030349, Blast_Score=434, Evalue=1e-122,
Organism=Saccharomyces cerevisiae, GI6321318, Length=644, Percent_Identity=36.4906832298137, Blast_Score=422, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6322939, Length=644, Percent_Identity=38.1987577639752, Blast_Score=363, Evalue=1e-101,
Organism=Saccharomyces cerevisiae, GI6322772, Length=687, Percent_Identity=34.6433770014556, Blast_Score=352, Evalue=3e-97,
Organism=Saccharomyces cerevisiae, GI6324338, Length=643, Percent_Identity=35.4587869362364, Blast_Score=338, Evalue=5e-93,
Organism=Saccharomyces cerevisiae, GI6323451, Length=557, Percent_Identity=29.2639138240575, Blast_Score=234, Evalue=8e-62,
Organism=Saccharomyces cerevisiae, GI6323776, Length=217, Percent_Identity=41.9354838709677, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI19921728, Length=644, Percent_Identity=36.0248447204969, Blast_Score=424, Evalue=1e-118,
Organism=Drosophila melanogaster, GI20129977, Length=659, Percent_Identity=37.1775417298938, Blast_Score=416, Evalue=1e-116,
Organism=Drosophila melanogaster, GI19921526, Length=727, Percent_Identity=36.0385144429161, Blast_Score=409, Evalue=1e-114,
Organism=Drosophila melanogaster, GI18859729, Length=690, Percent_Identity=36.0869565217391, Blast_Score=387, Evalue=1e-107,
Organism=Drosophila melanogaster, GI19920696, Length=667, Percent_Identity=35.0824587706147, Blast_Score=373, Evalue=1e-103,
Organism=Drosophila melanogaster, GI45550174, Length=646, Percent_Identity=33.9009287925697, Blast_Score=348, Evalue=1e-95,
Organism=Drosophila melanogaster, GI24643238, Length=507, Percent_Identity=35.7001972386588, Blast_Score=313, Evalue=4e-85,
Organism=Drosophila melanogaster, GI24585491, Length=602, Percent_Identity=30.5647840531561, Blast_Score=259, Evalue=1e-68,
Organism=Drosophila melanogaster, GI17136342, Length=559, Percent_Identity=31.6636851520572, Blast_Score=231, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24585920, Length=521, Percent_Identity=32.8214971209213, Blast_Score=231, Evalue=3e-60,
Organism=Drosophila melanogaster, GI24641942, Length=477, Percent_Identity=32.0754716981132, Blast_Score=228, Evalue=3e-59,
Organism=Drosophila melanogaster, GI17136508, Length=537, Percent_Identity=31.6573556797021, Blast_Score=219, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24642763, Length=500, Percent_Identity=30.8, Blast_Score=217, Evalue=6e-56,
Organism=Drosophila melanogaster, GI17136242, Length=240, Percent_Identity=39.1666666666667, Blast_Score=157, Evalue=4e-38,
Organism=Drosophila melanogaster, GI24641139, Length=288, Percent_Identity=32.6388888888889, Blast_Score=138, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR011709
- InterPro:   IPR007502
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR010222 [H]

Pfam domain/function: PF00270 DEAD; PF07717 DUF1605; PF04408 HA2; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 149557; Mature: 149426

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
ALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCHH
PKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQI
HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEE
KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA
EEEECCEEEEEECCCCHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC
TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEG
CCCHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
LGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATN
CCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCEEEEEEC
VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI
CCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCEEE
RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYL
CCCCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARN
HHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
ARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQN
CCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHC
RALLAEVEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH
FEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGENSDGVTVHIPLPILNQVEPH
HHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCCCCCEEEEECCCHHCCCCCC
GFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVAD
HHCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
DDIEQRDLHTWSFGELPKVYQQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAG
CCHHHHCCCCCCCCCCHHHHHHHCCCCEEEECHHHHCCCCCEEEEEECCHHHHHHHHHCC
QRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEERGGMVW
CCEEEEEECCCCHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHHCCCCEE
EPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEHHHHHHHHHHHH
EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLN
HHHHEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH
KIPKGMAIPDNVREIRWMLEELRVSYFAQQLGTPYPVSDKRIINAIEAC
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNESARNAVFDEI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHH
ALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAIAHHQVVIVAGETGSGKTTQL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEEECCCCCCCCCHH
PKICAELGRGKYGLIGHTQPRRLAARSVANRIAEEMETELGGFVGYKVRFTDQISDQTQI
HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCEE
KLMTDGILLAEIQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSA
EEEECCEEEEEECCCCHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEC
TIDPERFSKHFSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEG
CCCHHHHHHHCCCCCEEEECCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCC
LGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPHAGRRIVLATN
CCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCCCCCCCCCCEEEEEEC
VAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRTEEGICI
CCCCCEECCCEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHCCCHHHCCCCCCCCCCEEE
RLYSEEDFLSRPEFTDPEILRTNLASVILQMTALGLGDIEAFPFVEAPDKRNIQDGVRLL
EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH
EELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQD
HHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PRERPSDKQQSADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYL
CCCCCCCHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
RVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQEKNEYHGARN
HHHHHHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCC
ARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEPDWIEPLAKHLSKRSYSEPHW
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
SKKNAAVMAYEKVMLYGIPIVPKRLVNYGTIDPVLSREIFIRSALVEGDWETKHAFFKQN
CCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHC
RALLAEVEELEHKSRRRDILVDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLS
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHH
FEKEMLFKGDASHITDLDYPNFWHQGNLKLKLSYQFEPGENSDGVTVHIPLPILNQVEPH
HHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCCCCCEEEEECCCHHCCCCCC
GFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPLLDAMEKELRR
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHH
MTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDLHELKESLKEKVQETLSQVAD
HHCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
DDIEQRDLHTWSFGELPKVYQQKRGGFEVRAYPALVDKKDSVEIKLFETEQEQLSAMRAG
CCHHHHCCCCCCCCCCHHHHHHHCCCCEEEECHHHHCCCCCEEEEEECCHHHHHHHHHCC
QRRLILLNVPSPIKYLHANLPNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEERGGMVW
CCEEEEEECCCCHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHHCCCCEE
EPQAFEALKEHVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEHHHHHHHHHHHH
EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIESVANKYKELLN
HHHHEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH
KIPKGMAIPDNVREIRWMLEELRVSYFAQQLGTPYPVSDKRIINAIEAC
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7899078; 9097039; 9278503 [H]