| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081552
Identifier: 227081552
GI number: 227081552
Start: 1430184
End: 1430393
Strand: Reverse
Name: 227081552
Synonym: VCM66_1336
Alternate gene names: NA
Gene position: 1430393-1430184 (Counterclockwise)
Preceding gene: 227081554
Following gene: 227081551
Centisome position: 49.45
GC content: 48.1
Gene sequence:
>210_bases TTGGCTGAGCTGCCGAATCGGGTGTGGGCTGTGACGAAGTCAAAGCATTTCCTATTGTTATCTTTCCAAAAAACTGCGCG GATTGTACCACAGAGTTTTAGCAACACGCCCATGATCCCACGCTTTAGCCACCTTTACCTGCCTACAGAAACAGCAAATG CAAGCCTAATACTCAAAAGAAGCTTCGTTTTCGGCGCGATTGGCCGCTAA
Upstream 100 bases:
>100_bases TTAATTTTACTGGCACCATCAATGCGTTTACTGAAACGAAAACGGTCTTTGATCAAGCACTCTCCGAGCGCCTTTTTTAA ACTGGCAGCGCTATTGGCTT
Downstream 100 bases:
>100_bases AATGAAGATAGAACCTTAAGGAAACGAAGCGATTGTGAAAGCCTCTGAACTGAAAACGATTTTAAACCAGCTCCCCGATG ACCTTGATCCCGACGTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MAELPNRVWAVTKSKHFLLLSFQKTARIVPQSFSNTPMIPRFSHLYLPTETANASLILKRSFVFGAIGR
Sequences:
>Translated_69_residues MAELPNRVWAVTKSKHFLLLSFQKTARIVPQSFSNTPMIPRFSHLYLPTETANASLILKRSFVFGAIGR >Mature_68_residues AELPNRVWAVTKSKHFLLLSFQKTARIVPQSFSNTPMIPRFSHLYLPTETANASLILKRSFVFGAIGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7833; Mature: 7702
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELPNRVWAVTKSKHFLLLSFQKTARIVPQSFSNTPMIPRFSHLYLPTETANASLILKR CCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEE SFVFGAIGR CEEEEECCC >Mature Secondary Structure AELPNRVWAVTKSKHFLLLSFQKTARIVPQSFSNTPMIPRFSHLYLPTETANASLILKR CCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEE SFVFGAIGR CEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA