| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081551
Identifier: 227081551
GI number: 227081551
Start: 1429799
End: 1430149
Strand: Reverse
Name: 227081551
Synonym: VCM66_1335
Alternate gene names: NA
Gene position: 1430149-1429799 (Counterclockwise)
Preceding gene: 227081552
Following gene: 227081550
Centisome position: 49.44
GC content: 49.86
Gene sequence:
>351_bases GTGAAAGCCTCTGAACTGAAAACGATTTTAAACCAGCTCCCCGATGACCTTGATCCCGACGTGGTGATGGGGGAAGTGTG GCTTCCAGAACGCTTAATTGAAGCGCAGCTTGATGACGACATGCTGTTTCTCACCTTTGATAACGCGCCGGAAGAAGGGG AAGGCGAAGAGGAAGGTCGCGGCTTTGTGGAACATGAGATGGAATTGATCCGCTCACAGCTCATGACGATTTTGGCTGAG GACAGCGGCCCCAAAACCAAAGCCGAAGCACTACTGGCGTTGATTACTCTTGCCCACGAACGCACTAGCTCAGAATTTAT CGAAATTTTAGGTACTATGCTTGAAGAGTGA
Upstream 100 bases:
>100_bases ACAGAAACAGCAAATGCAAGCCTAATACTCAAAAGAAGCTTCGTTTTCGGCGCGATTGGCCGCTAAAATGAAGATAGAAC CTTAAGGAAACGAAGCGATT
Downstream 100 bases:
>100_bases CGCTCAAGGCCACATTGTTTAACCTACGACTCCCAATCTCCAAGGCTTGCCTATGTTTAATACACTCACCTCCCTGTTTA AGCAGCTTCTTGAAGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MKASELKTILNQLPDDLDPDVVMGEVWLPERLIEAQLDDDMLFLTFDNAPEEGEGEEEGRGFVEHEMELIRSQLMTILAE DSGPKTKAEALLALITLAHERTSSEFIEILGTMLEE
Sequences:
>Translated_116_residues MKASELKTILNQLPDDLDPDVVMGEVWLPERLIEAQLDDDMLFLTFDNAPEEGEGEEEGRGFVEHEMELIRSQLMTILAE DSGPKTKAEALLALITLAHERTSSEFIEILGTMLEE >Mature_116_residues MKASELKTILNQLPDDLDPDVVMGEVWLPERLIEAQLDDDMLFLTFDNAPEEGEGEEEGRGFVEHEMELIRSQLMTILAE DSGPKTKAEALLALITLAHERTSSEFIEILGTMLEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13045; Mature: 13045
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASELKTILNQLPDDLDPDVVMGEVWLPERLIEAQLDDDMLFLTFDNAPEEGEGEEEGR CCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCC GFVEHEMELIRSQLMTILAEDSGPKTKAEALLALITLAHERTSSEFIEILGTMLEE CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MKASELKTILNQLPDDLDPDVVMGEVWLPERLIEAQLDDDMLFLTFDNAPEEGEGEEEGR CCHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHCC GFVEHEMELIRSQLMTILAEDSGPKTKAEALLALITLAHERTSSEFIEILGTMLEE CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA