Click here to switch to the map view.

The map label for this gene is 227081549

Identifier: 227081549

GI number: 227081549

Start: 1429004

End: 1429186

Strand: Direct

Name: 227081549

Synonym: VCM66_1333

Alternate gene names: NA

Gene position: 1429004-1429186 (Clockwise)

Preceding gene: 227081548

Following gene: 227081553

Centisome position: 49.4

GC content: 42.08

Gene sequence:

>183_bases
GTGATATTCAGCAAATTGTTATGCAACGCATCAGATCTTGTTCTAGGCTTTTGTATGGTTGTCCACAAAGCCGAGTACAA
GAATGGAAAATACACTCTACGTCTGTTGGCTGGTGAATGCTCTAAGTTGTATCGCTGTGATGCTCTATTGGCGAATGACA
CCACCACTCTAGTGACTTTTTAG

Upstream 100 bases:

>100_bases
GCGGCTCAGGAATCGCAAGGTATTGAATGGGAAGGGCGTCAGCACTCAGGCTATGTTGATGCCTACAACTTGGCAAAGTT
AGCGTTAACCATGCTGTAAT

Downstream 100 bases:

>100_bases
ACAAGAAGTCCTAGATCAAAGCCCAAGTTCAAAAGCGCGAATTTCGCGCTTTTTGTCTTTCAGACAAAGGGAGAAAGTGT
CGGAGCCGATAACGCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MIFSKLLCNASDLVLGFCMVVHKAEYKNGKYTLRLLAGECSKLYRCDALLANDTTTLVTF

Sequences:

>Translated_60_residues
MIFSKLLCNASDLVLGFCMVVHKAEYKNGKYTLRLLAGECSKLYRCDALLANDTTTLVTF
>Mature_60_residues
MIFSKLLCNASDLVLGFCMVVHKAEYKNGKYTLRLLAGECSKLYRCDALLANDTTTLVTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6708; Mature: 6708

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
10.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFSKLLCNASDLVLGFCMVVHKAEYKNGKYTLRLLAGECSKLYRCDALLANDTTTLVTF
CCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCEEECCCCEEEEEC
>Mature Secondary Structure
MIFSKLLCNASDLVLGFCMVVHKAEYKNGKYTLRLLAGECSKLYRCDALLANDTTTLVTF
CCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHCCEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA