| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is 227081513
Identifier: 227081513
GI number: 227081513
Start: 1385910
End: 1387307
Strand: Direct
Name: 227081513
Synonym: VCM66_1297
Alternate gene names: NA
Gene position: 1385910-1387307 (Clockwise)
Preceding gene: 227081512
Following gene: 227081515
Centisome position: 47.91
GC content: 47.93
Gene sequence:
>1398_bases ATGGGGCTTTCTTTTTCGGCGTTATCTAGCCAAGAAGAAGAGGCAGCTTATCGCGGCGCTTTATGTCTGATCCGTGGTGA TCATAAATTAGTGATGACCCAAGAAGTGCTCACCGGAAAACTCTCCTTGCCCGGCGGTACGATTGAAGCGGGTGAAACAC CCCAAATGGCGGCTCAGCGTGAAACATGGCAAGAGACTGGCATGGTGGTTTCTGTTGGACGCTTGATTGGCCAGACATCG ACCGCGGTAGTCTATGAATGCGTTAGTGAATCTCAGGTGATCGCTTACTCTTACCAAAATGGTTTTGGAGGGTATGAACT GCCGATCTGGTTTGCGCCGGATTATGGGGTAGAAACCGTTTCTGCCATGTTGGTTAATCCAAGTTTCATCAAGGCTGAGC AGTATCGTTATCCAGAACAGTGGTCTTTTATTGCCGATTTATTCAAATTAAGCCAAGAGCAAGCGGTAGATTATGTGGCA GAGCTCCATAAAGCGGCTCCTCAATTTCAGCAGGTGGAATTAGAGTGGTTAGGGCAATTACAACATGGTGTCGCCCAACT AAAAAAGAGTATGCCGTGGTTACAAAACTTGATCTTAAGCGGGATGATTTTTAATCTTCCCGTGGTCGCTTTGGTTCTGT TTCCTTTGCTCTATTGGCAGCTTGGCAAACCTTATTGTTACAAGATTCTGTTTGCTATGTCGGTCACATCCTTGCTGTGC CTCGTCGCTCAGCAGGGGTTCGCGTTACCAAGACCACATGTTTACCAACCTGCATTAGAGCTGTTTCCAAGCTACGGCTT TGCCTTCCCGAATTTGCCTATCGCGCTTTGGAGCTGCTTAGGTGTGCTGGTGTGGCATGTGCAACAAGAGTTCACTCAGC GTTGGGTGATGCGTGTGTGGGTCGGTCTGTTTGCTTGGCTCTCATTTGCTTCTTTTTATTCGGGTAGTGCTTTTCTCAGT GATCTTGCCACTGGTGCCTTAGTGGGAGCCTTGGTCGCTTGGCACATTATTCGCCTCGATTTAAAACCGGGTGTGAATGT CGAGAGCCTACTTTGCTCTAAGTCGGTTTGGTGGGGATTGACCGTCGCTTGCGTGATCCTTGCTATCATCTGGCCGCAAC CCATTTTTACGCAATGGCTTGCGTTATTGGTGACGATCTCTGGTCTAGTGACCCTCTTAACACCAAGCTCTTCAACGCTT TCATTGCGTGGGGTGTTGCTAATGATCGCGCTGTTACTGTTAGCCGATCAGGGAATCTCCTTGTTGATTGAGCCCTTCAA TCACAGTTCATTCTATATGTTAGTGGGTGAAACTCTGCGCTATCCCGTGCTGATTTTACTGTTTGTGTTATTGGCTCGCC GCGGCTTAAAAGCTCCGATAGTAAGTTCCACATATTAA
Upstream 100 bases:
>100_bases TGCGTAAACCGCTGGTTTAGGTCAGTTCGTTTTTTTAAAGGAAACAATCTTGTTGGCATATGTTCGCGCATTTTGGTTAA TGTTGGGTTTCACATTCTGC
Downstream 100 bases:
>100_bases AATCAGTTTAAATAAAAACCGGAAGCCATTTGCTTCCGGTTTTTATTGATGACTCAAGTACTTGATTAGGCGGTAGTGTA AGCGCAGACGAATTCGGCAA
Product: MutT/nudix family protein
Products: NA
Alternate protein names: Membrane-Associated Phospholipid Phosphatase; PAP2 Superfamily Protein; Phosphohydrolase
Number of amino acids: Translated: 465; Mature: 464
Protein sequence:
>465_residues MGLSFSALSSQEEEAAYRGALCLIRGDHKLVMTQEVLTGKLSLPGGTIEAGETPQMAAQRETWQETGMVVSVGRLIGQTS TAVVYECVSESQVIAYSYQNGFGGYELPIWFAPDYGVETVSAMLVNPSFIKAEQYRYPEQWSFIADLFKLSQEQAVDYVA ELHKAAPQFQQVELEWLGQLQHGVAQLKKSMPWLQNLILSGMIFNLPVVALVLFPLLYWQLGKPYCYKILFAMSVTSLLC LVAQQGFALPRPHVYQPALELFPSYGFAFPNLPIALWSCLGVLVWHVQQEFTQRWVMRVWVGLFAWLSFASFYSGSAFLS DLATGALVGALVAWHIIRLDLKPGVNVESLLCSKSVWWGLTVACVILAIIWPQPIFTQWLALLVTISGLVTLLTPSSSTL SLRGVLLMIALLLLADQGISLLIEPFNHSSFYMLVGETLRYPVLILLFVLLARRGLKAPIVSSTY
Sequences:
>Translated_465_residues MGLSFSALSSQEEEAAYRGALCLIRGDHKLVMTQEVLTGKLSLPGGTIEAGETPQMAAQRETWQETGMVVSVGRLIGQTS TAVVYECVSESQVIAYSYQNGFGGYELPIWFAPDYGVETVSAMLVNPSFIKAEQYRYPEQWSFIADLFKLSQEQAVDYVA ELHKAAPQFQQVELEWLGQLQHGVAQLKKSMPWLQNLILSGMIFNLPVVALVLFPLLYWQLGKPYCYKILFAMSVTSLLC LVAQQGFALPRPHVYQPALELFPSYGFAFPNLPIALWSCLGVLVWHVQQEFTQRWVMRVWVGLFAWLSFASFYSGSAFLS DLATGALVGALVAWHIIRLDLKPGVNVESLLCSKSVWWGLTVACVILAIIWPQPIFTQWLALLVTISGLVTLLTPSSSTL SLRGVLLMIALLLLADQGISLLIEPFNHSSFYMLVGETLRYPVLILLFVLLARRGLKAPIVSSTY >Mature_464_residues GLSFSALSSQEEEAAYRGALCLIRGDHKLVMTQEVLTGKLSLPGGTIEAGETPQMAAQRETWQETGMVVSVGRLIGQTST AVVYECVSESQVIAYSYQNGFGGYELPIWFAPDYGVETVSAMLVNPSFIKAEQYRYPEQWSFIADLFKLSQEQAVDYVAE LHKAAPQFQQVELEWLGQLQHGVAQLKKSMPWLQNLILSGMIFNLPVVALVLFPLLYWQLGKPYCYKILFAMSVTSLLCL VAQQGFALPRPHVYQPALELFPSYGFAFPNLPIALWSCLGVLVWHVQQEFTQRWVMRVWVGLFAWLSFASFYSGSAFLSD LATGALVGALVAWHIIRLDLKPGVNVESLLCSKSVWWGLTVACVILAIIWPQPIFTQWLALLVTISGLVTLLTPSSSTLS LRGVLLMIALLLLADQGISLLIEPFNHSSFYMLVGETLRYPVLILLFVLLARRGLKAPIVSSTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51703; Mature: 51572
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSFSALSSQEEEAAYRGALCLIRGDHKLVMTQEVLTGKLSLPGGTIEAGETPQMAAQR CCCCCHHHCCCHHHHHHHCCEEEEECCCEEEEEHHHHHCEEECCCCCCCCCCCHHHHHHH ETWQETGMVVSVGRLIGQTSTAVVYECVSESQVIAYSYQNGFGGYELPIWFAPDYGVETV HHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCHHHH SAMLVNPSFIKAEQYRYPEQWSFIADLFKLSQEQAVDYVAELHKAAPQFQQVELEWLGQL HHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QHGVAQLKKSMPWLQNLILSGMIFNLPVVALVLFPLLYWQLGKPYCYKILFAMSVTSLLC HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LVAQQGFALPRPHVYQPALELFPSYGFAFPNLPIALWSCLGVLVWHVQQEFTQRWVMRVW HHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLFAWLSFASFYSGSAFLSDLATGALVGALVAWHIIRLDLKPGVNVESLLCSKSVWWGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHH TVACVILAIIWPQPIFTQWLALLVTISGLVTLLTPSSSTLSLRGVLLMIALLLLADQGIS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCE LLIEPFNHSSFYMLVGETLRYPVLILLFVLLARRGLKAPIVSSTY EEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure GLSFSALSSQEEEAAYRGALCLIRGDHKLVMTQEVLTGKLSLPGGTIEAGETPQMAAQR CCCCHHHCCCHHHHHHHCCEEEEECCCEEEEEHHHHHCEEECCCCCCCCCCCHHHHHHH ETWQETGMVVSVGRLIGQTSTAVVYECVSESQVIAYSYQNGFGGYELPIWFAPDYGVETV HHHHHCCHHHHHHHHHCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEECCCCCHHHH SAMLVNPSFIKAEQYRYPEQWSFIADLFKLSQEQAVDYVAELHKAAPQFQQVELEWLGQL HHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH QHGVAQLKKSMPWLQNLILSGMIFNLPVVALVLFPLLYWQLGKPYCYKILFAMSVTSLLC HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LVAQQGFALPRPHVYQPALELFPSYGFAFPNLPIALWSCLGVLVWHVQQEFTQRWVMRVW HHHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VGLFAWLSFASFYSGSAFLSDLATGALVGALVAWHIIRLDLKPGVNVESLLCSKSVWWGL HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHH TVACVILAIIWPQPIFTQWLALLVTISGLVTLLTPSSSTLSLRGVLLMIALLLLADQGIS HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCE LLIEPFNHSSFYMLVGETLRYPVLILLFVLLARRGLKAPIVSSTY EEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA