| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is mglB [H]
Identifier: 227081496
GI number: 227081496
Start: 1366519
End: 1367493
Strand: Direct
Name: mglB [H]
Synonym: VCM66_1280
Alternate gene names: 227081496
Gene position: 1366519-1367493 (Clockwise)
Preceding gene: 227081492
Following gene: 227081498
Centisome position: 47.24
GC content: 50.15
Gene sequence:
>975_bases ATGAGAAAGTTAACTGTTTTAGCAATGCTTTCTGCTGGTATGGGTTTTGGTACACAAGCTCTGGCAGATACCACCATTGG CTTTACCATCTACAAATACGATGACAACTTTATGTCGGTTGTTCGCCAAGCGATTGAAAAAGAAGCTGCGGCGGATAGCA ACACGCGTATCCTCATGAATGACTCGCAAAATAGCCAGTCGATGCAAAATGACCAAGTCGATGTGATGTTGGCGCGTGGC GTACAAGCGCTCGCGATCAACCTTGTTGACCCGGCGGCTGCACCCACCATCATCCAGAAAGCTAAAATCGACGACGTTCC TGTGGTGTTTTACAACAAAGAACCGTCCGCTGAAGCGATGGCCAGTTATGACAAAGCGTTTTATGTCGGAACTGACTCTA AAGAGTCTGGCATCATTCAAGGCGATTTGATTTCTGCGCAGTGGAAAGCTAACCCAGCGTGGGATAAAAACGGCGATGGT GTACTGCAATACGTTATGCTGAAAGGCGAACCAGGCCACCCAGATGCGGAAGCGCGTACCACTTACTCCGTGCAAACCAT CAACGACAACGGCATCAAAACTCAAGAACTGCACATGGATACCGGCATGTGGGATACCGCGATGGCCAAAGACAAGATGG ACGCGTGGCTCTCTGGTCCTAACGGCAGCAAGATCGAAGTCGTGATTGCCAACAACGACGGTATGGCGATGGGCGCGATT GAAGCTCTGCGCGGTGCTGGCCAAAAAATCCCAGTATTTGGTGTCGATGCTCTGGCAGAAGCCTTGGCACTCATTAAGTC CGGCGACATGGCGGGTACGGTGCTGAATGATGCGCAAAACCAAGCTAAAGCGACCTTTGAATTGGCGCGTAATCTAGCCA ATGGCAAACCTGCTGCCGAAGGCACTCAGTGGACTATTGAGAATAAGGTCGTTCGCGTACCTTACGTAGGCGTTGACATC AATAACGTCGAATAA
Upstream 100 bases:
>100_bases AACGTTTTCACTGACTGTGCAAGTGGATTTTTGTACAAAAAGGTCGAGTAAGCGTTGTTCCCTACACACGTAATACAAAA CAACAAATAGGACTTGTTCA
Downstream 100 bases:
>100_bases CCTTGGCGAGAAGAGGGGAAGGAAACATCCCCTCTTCACAATCCCTTCTTATGTTGAAGCTGCAACGCTAAGTAATTTGG ATATATTTTTGCAACATCGA
Product: galactoside ABC transporter, periplasmic D-galactose/D-glucose-binding protein
Products: ADP; phosphate; beta-D-galactose [Cytoplasm] [C]
Alternate protein names: GBP; D-galactose/ D-glucose-binding protein; GGBP [H]
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRKLTVLAMLSAGMGFGTQALADTTIGFTIYKYDDNFMSVVRQAIEKEAAADSNTRILMNDSQNSQSMQNDQVDVMLARG VQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAMASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDG VLQYVMLKGEPGHPDAEARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGMAMGAI EALRGAGQKIPVFGVDALAEALALIKSGDMAGTVLNDAQNQAKATFELARNLANGKPAAEGTQWTIENKVVRVPYVGVDI NNVE
Sequences:
>Translated_324_residues MRKLTVLAMLSAGMGFGTQALADTTIGFTIYKYDDNFMSVVRQAIEKEAAADSNTRILMNDSQNSQSMQNDQVDVMLARG VQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAMASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDG VLQYVMLKGEPGHPDAEARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGMAMGAI EALRGAGQKIPVFGVDALAEALALIKSGDMAGTVLNDAQNQAKATFELARNLANGKPAAEGTQWTIENKVVRVPYVGVDI NNVE >Mature_324_residues MRKLTVLAMLSAGMGFGTQALADTTIGFTIYKYDDNFMSVVRQAIEKEAAADSNTRILMNDSQNSQSMQNDQVDVMLARG VQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAMASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDG VLQYVMLKGEPGHPDAEARTTYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGMAMGAI EALRGAGQKIPVFGVDALAEALALIKSGDMAGTVLNDAQNQAKATFELARNLANGKPAAEGTQWTIENKVVRVPYVGVDI NNVE
Specific function: This protein is involved in the active transport of galactose and glucose. It plays a role in the chemotaxis towards the two sugars by interacting with the trg chemoreceptor [H]
COG id: COG1879
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788473, Length=324, Percent_Identity=70.3703703703704, Blast_Score=466, Evalue=1e-132,
Paralogues:
None
Copy number: 4720 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1320 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 40 Molecules/Cell In: Stationary Phase
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001761 [H]
Pfam domain/function: PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 34785; Mature: 34785
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLTVLAMLSAGMGFGTQALADTTIGFTIYKYDDNFMSVVRQAIEKEAAADSNTRILMN CCCEEEEEEHHCCCCCCCHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE DSQNSQSMQNDQVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAM CCCCCCHHCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEECCCCCHHHH ASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDGVLQYVMLKGEPGHPDAEART HHCCCEEEEECCCCCCCEEEECEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEE TYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGMAMGAI EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHH EALRGAGQKIPVFGVDALAEALALIKSGDMAGTVLNDAQNQAKATFELARNLANGKPAAE HHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTQWTIENKVVRVPYVGVDINNVE CCEEEECCEEEEEEEEEEEECCCC >Mature Secondary Structure MRKLTVLAMLSAGMGFGTQALADTTIGFTIYKYDDNFMSVVRQAIEKEAAADSNTRILMN CCCEEEEEEHHCCCCCCCHHHHCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEE DSQNSQSMQNDQVDVMLARGVQALAINLVDPAAAPTIIQKAKIDDVPVVFYNKEPSAEAM CCCCCCHHCCCCEEEEECCCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEECCCCCHHHH ASYDKAFYVGTDSKESGIIQGDLISAQWKANPAWDKNGDGVLQYVMLKGEPGHPDAEART HHCCCEEEEECCCCCCCEEEECEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCEE TYSVQTINDNGIKTQELHMDTGMWDTAMAKDKMDAWLSGPNGSKIEVVIANNDGMAMGAI EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHEECCCCCCEEEEEEECCCCCCHHHH EALRGAGQKIPVFGVDALAEALALIKSGDMAGTVLNDAQNQAKATFELARNLANGKPAAE HHHHCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC GTQWTIENKVVRVPYVGVDINNVE CCEEEECCEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; beta-D-galactose [Periplasm]; H2O [C]
Specific reaction: ATP + beta-D-galactose [Periplasm] + H2O = ADP + phosphate + beta-D-galactose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA