| Definition | Vibrio cholerae M66-2 chromosome I, complete genome. |
|---|---|
| Accession | NC_012578 |
| Length | 2,892,523 |
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The map label for this gene is mglA [H]
Identifier: 227081498
GI number: 227081498
Start: 1367663
End: 1369207
Strand: Direct
Name: mglA [H]
Synonym: VCM66_1282
Alternate gene names: 227081498
Gene position: 1367663-1369207 (Clockwise)
Preceding gene: 227081496
Following gene: 227081499
Centisome position: 47.28
GC content: 46.28
Gene sequence:
>1545_bases GTGTTGTCTGAATTTTTGCATAATAAAAGTGATGCCATGGTCAATCAAACACATGAATTCCTGTTGGAAATGACAGGGGT GAGTAAAGAGTTCCCCGGAGTGAAAGCTCTGGATAAGGTGAATTTAAAAGTGCGTCCGCATTCGGTTCATGCCTTGATGG GTGAAAATGGCGCAGGCAAATCCACCTTGTTGAAATGCTTATTTGGTATTTATGAGAAAGATGAAGGCGATATCATTTTT CTTGGCCAGCATGTGAACTTTTCCTCATCAAAAGAGGCGCTGGAATCCGGTGTCTCTATGGTTCACCAAGAGTTGAACCA AGTAAAACAGTGCTCGGTGATGGATAATATTTGGCTTGGCCGTTATCCCACCAAAGGATTTTTTGTCGATCACGACAAAA TGTATCGGGATACCAAAGCGATTTTTGCCGAACTCGATATTGATATCGATCCGAAGGTCAAAGTCGCGACCTTGTCGGTT TCACAGATGCAGATGCTCGAGATCGCCAAAGCGTTTTCCTACGATGCCAAAGTGGTGATCATGGATGAACCTACCTCATC CCTGACCGAAAAAGAGGTAAACCATCTTTTTACCATCATCAAAAAGCTCAAAGAAAAAGGCTGTGGGGTGGTGTACATCT CGCACAAAATGGAAGAGATCTTTTCTATTTGCGATGAGATCACCATTTTGCGTGATGGCCAGTGGGTCGATACGCGTCCG TTGAAAGGGTTGGACATGGACAAGATCATTTCGATGATGGTTGGCCGTGAACTGACCCAGCGTTTCCCTGAAAAAAGCAA CGAACCGAAGAATGTCATTCTTGAGGTGAAGAATCTCACCGCACTCAATCAACCCTCGATTCAAGATATTTCGTTTGAAC TACGAGCTGGGGAAATTTTGGGCGTGGCGGGTCTCGTCGGTTCGCGCCGTACCGACATTGTGGAGACCATTTTTGGTGTG CGTGAACGCAGTGCCGGACATATTCTGCTCCATGGTCGTGAAATGAAAAATCACGATGCGCATGAAGCGATCAGAAACGG TTTTGCACTCGTGACCGAAGAGCGCCGCTCGACGGGGATTTACTCCAATCTCGACATCACTTTTAACTCGTTAGTTGCCA ACGTGGACGAGTACAAAACGCCTTACGGTCTACTCAGTGACAAGAAGATGAAAAGTGATACGCAATGGGTGATTGATTCT ATGCGGGTGAAAACCCCGTCGCATCAAACTCATATCGGTTCGCTTTCCGGTGGTAACCAGCAAAAAGTCATCATCGGGCG CTGGCTGCTGACTCAACCCGAGATTTTGATGTTGGATGAACCGACACGCGGTATTGATGTGGGCGCAAAGTACGAAATTT ATCAGCTGATTTTAGAGCTGGCCAAGAAAGACAAAGGCATCATCATTATTTCCTCTGAGATGCCGGAACTGCTCGGAATT ACCGACCGGATCATGGTGATGAGCAACGGCCGCAATGCAGGCATTGTGAATACCAAACAAACTTCTCAGAACGAAATTCT AGAACTGGCCTCTCGATACCTCTAA
Upstream 100 bases:
>100_bases AAGTAATTTGGATATATTTTTGCAACATCGAAAGATTCAGCGACAGATCAACGGATTTGCCGCACAGAGATATCACGCCG TGTGTACCACGCATTGATAT
Downstream 100 bases:
>100_bases GGAAATGACTATGGATGCTGTCAAATCATTTGCAATTAAACATTTAAAAGAGGGCGCAATCTACGCAGTGCTGTTTATTC TGCTGGCGATTATTGTGATT
Product: galactose/methyl galaxtoside transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 514
Protein sequence:
>514_residues MLSEFLHNKSDAMVNQTHEFLLEMTGVSKEFPGVKALDKVNLKVRPHSVHALMGENGAGKSTLLKCLFGIYEKDEGDIIF LGQHVNFSSSKEALESGVSMVHQELNQVKQCSVMDNIWLGRYPTKGFFVDHDKMYRDTKAIFAELDIDIDPKVKVATLSV SQMQMLEIAKAFSYDAKVVIMDEPTSSLTEKEVNHLFTIIKKLKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRP LKGLDMDKIISMMVGRELTQRFPEKSNEPKNVILEVKNLTALNQPSIQDISFELRAGEILGVAGLVGSRRTDIVETIFGV RERSAGHILLHGREMKNHDAHEAIRNGFALVTEERRSTGIYSNLDITFNSLVANVDEYKTPYGLLSDKKMKSDTQWVIDS MRVKTPSHQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKYEIYQLILELAKKDKGIIIISSEMPELLGI TDRIMVMSNGRNAGIVNTKQTSQNEILELASRYL
Sequences:
>Translated_514_residues MLSEFLHNKSDAMVNQTHEFLLEMTGVSKEFPGVKALDKVNLKVRPHSVHALMGENGAGKSTLLKCLFGIYEKDEGDIIF LGQHVNFSSSKEALESGVSMVHQELNQVKQCSVMDNIWLGRYPTKGFFVDHDKMYRDTKAIFAELDIDIDPKVKVATLSV SQMQMLEIAKAFSYDAKVVIMDEPTSSLTEKEVNHLFTIIKKLKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRP LKGLDMDKIISMMVGRELTQRFPEKSNEPKNVILEVKNLTALNQPSIQDISFELRAGEILGVAGLVGSRRTDIVETIFGV RERSAGHILLHGREMKNHDAHEAIRNGFALVTEERRSTGIYSNLDITFNSLVANVDEYKTPYGLLSDKKMKSDTQWVIDS MRVKTPSHQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKYEIYQLILELAKKDKGIIIISSEMPELLGI TDRIMVMSNGRNAGIVNTKQTSQNEILELASRYL >Mature_514_residues MLSEFLHNKSDAMVNQTHEFLLEMTGVSKEFPGVKALDKVNLKVRPHSVHALMGENGAGKSTLLKCLFGIYEKDEGDIIF LGQHVNFSSSKEALESGVSMVHQELNQVKQCSVMDNIWLGRYPTKGFFVDHDKMYRDTKAIFAELDIDIDPKVKVATLSV SQMQMLEIAKAFSYDAKVVIMDEPTSSLTEKEVNHLFTIIKKLKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRP LKGLDMDKIISMMVGRELTQRFPEKSNEPKNVILEVKNLTALNQPSIQDISFELRAGEILGVAGLVGSRRTDIVETIFGV RERSAGHILLHGREMKNHDAHEAIRNGFALVTEERRSTGIYSNLDITFNSLVANVDEYKTPYGLLSDKKMKSDTQWVIDS MRVKTPSHQTHIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKYEIYQLILELAKKDKGIIIISSEMPELLGI TDRIMVMSNGRNAGIVNTKQTSQNEILELASRYL
Specific function: Part of the ABC transporter complex MglABC involved in galactose/methyl galactoside import. Responsible for energy coupling to the transport system [H]
COG id: COG1129
COG function: function code G; ABC-type sugar transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=227, Percent_Identity=25.9911894273128, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI47078218, Length=231, Percent_Identity=24.2424242424242, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI45446740, Length=231, Percent_Identity=24.2424242424242, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI9961252, Length=262, Percent_Identity=25.5725190839695, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4505771, Length=262, Percent_Identity=25.5725190839695, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI42741659, Length=216, Percent_Identity=27.3148148148148, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI21536376, Length=230, Percent_Identity=23.9130434782609, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI9961250, Length=269, Percent_Identity=24.907063197026, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI11967971, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI153792144, Length=223, Percent_Identity=24.6636771300448, Blast_Score=66, Evalue=8e-11, Organism=Escherichia coli, GI1788472, Length=496, Percent_Identity=77.8225806451613, Blast_Score=824, Evalue=0.0, Organism=Escherichia coli, GI1790190, Length=496, Percent_Identity=43.1451612903226, Blast_Score=424, Evalue=1e-120, Organism=Escherichia coli, GI1789991, Length=502, Percent_Identity=41.2350597609562, Blast_Score=392, Evalue=1e-110, Organism=Escherichia coli, GI1790525, Length=501, Percent_Identity=41.3173652694611, Blast_Score=381, Evalue=1e-107, Organism=Escherichia coli, GI1788210, Length=491, Percent_Identity=38.4928716904277, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI1788897, Length=468, Percent_Identity=38.6752136752137, Blast_Score=338, Evalue=7e-94, Organism=Escherichia coli, GI48995001, Length=499, Percent_Identity=35.0701402805611, Blast_Score=329, Evalue=2e-91, Organism=Escherichia coli, GI1787792, Length=486, Percent_Identity=32.5102880658436, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI145693107, Length=508, Percent_Identity=23.6220472440945, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI48994943, Length=492, Percent_Identity=21.9512195121951, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789864, Length=226, Percent_Identity=25.6637168141593, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1788506, Length=495, Percent_Identity=21.8181818181818, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI87082268, Length=222, Percent_Identity=23.8738738738739, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1786319, Length=231, Percent_Identity=27.2727272727273, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=24.1071428571429, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI1787029, Length=200, Percent_Identity=27, Blast_Score=82, Evalue=7e-17, Organism=Escherichia coli, GI1786345, Length=213, Percent_Identity=28.6384976525822, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI48994883, Length=230, Percent_Identity=27.8260869565217, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788225, Length=234, Percent_Identity=26.0683760683761, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1787712, Length=216, Percent_Identity=24.0740740740741, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789593, Length=217, Percent_Identity=24.8847926267281, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1786654, Length=211, Percent_Identity=29.3838862559242, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=26.5765765765766, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790544, Length=227, Percent_Identity=25.9911894273128, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI87081709, Length=218, Percent_Identity=25.2293577981651, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789672, Length=250, Percent_Identity=23.6, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI48994997, Length=231, Percent_Identity=25.974025974026, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1790739, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=23.5294117647059, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788165, Length=206, Percent_Identity=24.7572815533981, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1786872, Length=223, Percent_Identity=25.5605381165919, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788644, Length=188, Percent_Identity=25.531914893617, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1786803, Length=189, Percent_Identity=28.042328042328, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI87081782, Length=222, Percent_Identity=26.5765765765766, Blast_Score=69, Evalue=1e-12, Organism=Escherichia coli, GI1787370, Length=215, Percent_Identity=23.2558139534884, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1786563, Length=216, Percent_Identity=25.462962962963, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788450, Length=219, Percent_Identity=26.9406392694064, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1786975, Length=435, Percent_Identity=22.5287356321839, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1787758, Length=210, Percent_Identity=24.7619047619048, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786253, Length=187, Percent_Identity=27.807486631016, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1789873, Length=211, Percent_Identity=26.5402843601896, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=24.6511627906977, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1789032, Length=212, Percent_Identity=27.3584905660377, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1787759, Length=245, Percent_Identity=27.3469387755102, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787164, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790162, Length=233, Percent_Identity=29.1845493562232, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1790467, Length=212, Percent_Identity=24.5283018867925, Blast_Score=62, Evalue=8e-11, Organism=Escherichia coli, GI1787105, Length=227, Percent_Identity=21.1453744493392, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI115533608, Length=276, Percent_Identity=24.2753623188406, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI25146777, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=6e-12, Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=24.537037037037, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17565586, Length=203, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193202349, Length=210, Percent_Identity=26.1904761904762, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6324314, Length=567, Percent_Identity=20.8112874779541, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI45550390, Length=205, Percent_Identity=26.8292682926829, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24666092, Length=244, Percent_Identity=25, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI28571209, Length=219, Percent_Identity=26.9406392694064, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015862 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.17 [H]
Molecular weight: Translated: 57803; Mature: 57803
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: PS00878 ODR_DC_2_1 ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEFLHNKSDAMVNQTHEFLLEMTGVSKEFPGVKALDKVNLKVRPHSVHALMGENGAGK CCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEECCCCEEEEECCCCCCH STLLKCLFGIYEKDEGDIIFLGQHVNFSSSKEALESGVSMVHQELNQVKQCSVMDNIWLG HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RYPTKGFFVDHDKMYRDTKAIFAELDIDIDPKVKVATLSVSQMQMLEIAKAFSYDAKVVI CCCCCCEEECHHHHHHHHHHHHEEECCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEE MDEPTSSLTEKEVNHLFTIIKKLKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRP EECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHEEEEECCCEECCCC LKGLDMDKIISMMVGRELTQRFPEKSNEPKNVILEVKNLTALNQPSIQDISFELRAGEIL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEE GVAGLVGSRRTDIVETIFGVRERSAGHILLHGREMKNHDAHEAIRNGFALVTEERRSTGI EEHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECHHCCCC YSNLDITFNSLVANVDEYKTPYGLLSDKKMKSDTQWVIDSMRVKTPSHQTHIGSLSGGNQ EEECCEEHHHHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCEECCCCCCCC QKVIIGRWLLTQPEILMLDEPTRGIDVGAKYEIYQLILELAKKDKGIIIISSEMPELLGI CEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHCC TDRIMVMSNGRNAGIVNTKQTSQNEILELASRYL CEEEEEEECCCCCCEEECCCCCHHHHHHHHHHCC >Mature Secondary Structure MLSEFLHNKSDAMVNQTHEFLLEMTGVSKEFPGVKALDKVNLKVRPHSVHALMGENGAGK CCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCEEEECCCCEEEEECCCCCCH STLLKCLFGIYEKDEGDIIFLGQHVNFSSSKEALESGVSMVHQELNQVKQCSVMDNIWLG HHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RYPTKGFFVDHDKMYRDTKAIFAELDIDIDPKVKVATLSVSQMQMLEIAKAFSYDAKVVI CCCCCCEEECHHHHHHHHHHHHEEECCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCEEEE MDEPTSSLTEKEVNHLFTIIKKLKEKGCGVVYISHKMEEIFSICDEITILRDGQWVDTRP EECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHEEEEECCCEECCCC LKGLDMDKIISMMVGRELTQRFPEKSNEPKNVILEVKNLTALNQPSIQDISFELRAGEIL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEEECCCEE GVAGLVGSRRTDIVETIFGVRERSAGHILLHGREMKNHDAHEAIRNGFALVTEERRSTGI EEHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECHHCCCC YSNLDITFNSLVANVDEYKTPYGLLSDKKMKSDTQWVIDSMRVKTPSHQTHIGSLSGGNQ EEECCEEHHHHHHCHHHHCCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCEECCCCCCCC QKVIIGRWLLTQPEILMLDEPTRGIDVGAKYEIYQLILELAKKDKGIIIISSEMPELLGI CEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHCC TDRIMVMSNGRNAGIVNTKQTSQNEILELASRYL CEEEEEEECCCCCCEEECCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]